- "Do you believe you are the Chosen One?"
"How can I know?"
"I can tell you what I believe. I believe you will bring balance to the Force. That you will face your demons and save the universe."
- ―Qui-Gon Jinn and Anakin Skywalker
Anakin Skywalker was a legendary Force-sensitive human male who was a Jedi Knight of the Galactic Republic and the prophesied Chosen One of the Jedi Order, destined to bring balance to the Force. Also known as "Ani" during his childhood, Skywalker earned the moniker "Hero With No Fear" from his accomplishments in the Clone Wars. His alter ego, Darth Vader, the Dark Lord of the Sith, was created when Skywalker turned to the dark side of the Force, pledging his allegiance to the Sith Lord Darth Sidious at the end of the Republic Era.
A vergence in the Force, Skywalker was born on the desert planet of Tatooine in the Outer Rim Territories in 41 BBY. He was the son of Shmi Skywalker, a slave who conceived a child without a father. His blood contained over twenty-thousand midi-chlorians, surpassing that of Grand Master Yoda and all other Jedi in the galaxy. Qui-Gon Jinn, the Jedi Master who discovered Skywalker during the Invasion of Naboo in 32 BBY, theorized that Skywalker was conceived by the midi-chlorians. Following the Battle of Naboo, the Jedi High Council admitted Skywalker into the Order as the Padawan of Jedi Knight Obi-Wan Kenobi despite feeling that he was too old and emotional to adhere to the Jedi Code. During the early days of the Clone Wars, Skywalker served as a Jedi General in the Grand Army of the Republic, commanding the clone troopers of the elite 501st Legion against the Confederacy of Independent Systems. He also oversaw the Jedi training of his own apprentice, Ahsoka Tano, after receiving his knighthood. Although Jedi doctrine prohibited personal relationships, Skywalker had a secret wife, Senator Padmé Amidala of Naboo.
In 19 BBY, Skywalker learned that Supreme Chancellor Sheev Palpatine was Darth Sidious, the elusive Dark Lord of the Sith who orchestrated the war in order to take over the galaxy. While Skywalker was caring and compassionate, his fear of losing Amidala in childbirth caused him to turn against the Jedi Order, believing Sidious had the knowledge to cheat death. Consumed by the persona of Darth Vader, the fallen Jedi Knight marched his legion on the Jedi Temple of Coruscant where they executed its inhabitants, including Jedi younglings, as part of Order 66 and the Great Jedi Purge. Vader was then sent to Mustafar to exterminate the Separatist Council at the behest of his Sith Master, now the self-proclaimed Galactic Emperor. Vader subsequently sustained severe injuries in his duel with Kenobi, and was rebuilt as an armored cyborg while his wife died of a broken heart, though not before giving birth to the twins Luke Skywalker and Princess Leia Organa who were hidden from their father and the Emperor as the Galactic Empire rose to power.
Vader enforced the rule of the New Order as the Emperor's Sith apprentice throughout most of the Imperial Era. In the aftermath of the Battle of Yavin in 0 BBY, he discovered the existence of his son and was determined to turn Luke to the dark side. Luke sought to become a Jedi, like his father before him, and believed that Vader had the potential to turn back to the light side of the Force. Vader was defeated by Luke during the Battle of Endor in 4 ABY, but the young Jedi refused to strike down his father in anger, causing the Emperor to torture Luke with Force lightning. The pain inflicted on his son awakened the part of Vader that was still Anakin, resulting in a redeemed Skywalker killing Sidious at the cost of his own life. Having destroyed the Sith and fulfilled his destiny as the Chosen One, Skywalker made peace with his son and became one with the Force.
Anakin Skywalker was one of the most powerful Jedi and Sith in galactic history. The Force was especially strong in the Skywalker bloodline, which culminated in Anakin's grandson, Ben Solo, Organa's son who was born by the end of the Galactic Civil War in 5 ABY. Solo would turn to the dark side as well, becoming the dark warrior Kylo Ren during the rise of the First Order. Like his grandfather, however, Solo found redemption by sacrificing his life for the love of another—the Jedi apprentice Rey, who heard Skywalker's voice telling her to restore the balance, as he once had, during the Battle of Exegol in 35 ABY. Solo's death ended the Skywalker bloodline, although Rey, the granddaughter of Sidious, rejected her true heritage and took their surname to honor their legacy.
- 1 Biography
- 1.1 Early life
- 1.2 Discovery
- 1.3 Kenobi's Padawan
- 1.4 Protecting Padmé Amidala
- 1.5 The Clone Wars begin
- 1.5.1 General of the 501st
- 1.5.2 Battles at Corvair sector and Kudo III
- 1.5.3 Siege of Hisseen
- 1.5.4 Battle of Christophsis
- 1.5.5 Battle of Teth
- 1.5.6 The Malevolence
- 1.5.7 R2-D2 lost
- 1.5.8 Captured on Florrum
- 1.5.9 Quell and Maridun
- 1.5.10 Orto Plutonia
- 1.5.11 Blue Shadow Virus
- 1.5.12 Battle of Ryloth
- 1.5.13 Holocron heist
- 1.5.14 Battle of Felucia
- 1.5.15 The Zillo Beast
- 1.6 No end in sight
- 1.7 Personal and wartime conflicts
- 1.8 Nearing the end
- 1.8.1 Tano's trial
- 1.8.2 Kamino conspiracy
- 1.8.3 Mission to Batuu
- 1.8.4 Clovis returns
- 1.8.5 Sifo-Dyas' secret
- 1.8.6 Yoda's journey
- 1.8.7 Bombing of the Temple
- 1.8.8 Amidala's departure
- 1.8.9 Crystal crisis on Utapau
- 1.8.10 Stationed on Coruscant
- 1.8.11 Vos and Ventress
- 1.8.12 Anaxes
- 1.9 Birth of Darth Vader
- 1.10 Age of the Empire
- 1.10.1 Duel on Mustafar
- 1.10.2 Rebirth
- 1.10.3 Hunting a kyber crystal
- 1.10.4 Training the Inquisitorius
- 1.10.5 Hunt for Jocasta Nu
- 1.10.6 Defiance from the Imperial hierarchy
- 1.10.7 Mission to Mon Cala
- 1.10.8 The Emperor's emissary
- 1.10.9 Investigation on Geonosis
- 1.10.10 Relics of the Clone Wars
- 1.10.11 Rebellion on Ryloth
- 1.10.12 Teller's campaign
- 1.10.13 Submission to Ahr
- 1.10.14 Hunt on Chandar's Folly
- 1.10.15 Hunt for Eeth Koth
- 1.10.16 Hunting rogue Inquisitors
- 1.10.17 Building Fortress Vader
- 1.10.18 Mission to Nur
- 1.10.19 Lothal
- 1.10.20 Duel on Malachor
- 1.10.21 Meeting Thrawn
- 1.10.22 Investigating a disturbance in the Force
- 1.10.23 World Between Worlds
- 1.10.24 Cianap
- 1.10.25 An unwelcome romance
- 1.10.26 Battle against the Benathy
- 1.10.27 Visit on Mustafar
- 1.11 Galactic Civil War
- 1.11.1 Stolen plans
- 1.11.2 Pursuing the plans
- 1.11.3 Duel on the Death Star
- 1.11.4 Yavin 4
- 1.11.5 Post-Yavin ventures
- 1.11.6 Cymoon 1
- 1.11.7 Yavin's aftermath
- 1.11.8 Tatooine negotiations
- 1.11.9 Servitude unto Tagge
- 1.11.10 A droid army
- 1.11.11 Cylo's enforcers
- 1.11.12 Parenthood
- 1.11.13 Anthan Prime
- 1.11.14 Shu-Torun
- 1.11.15 Vrogas Vas
- 1.11.16 Shu-Torun War
- 1.11.17 Hunt for Cylo
- 1.11.18 Slaying the unworthy
- 1.11.19 Skirmish on the Scorca Retreat
- 1.11.20 Tureen VII
- 1.11.21 Confronting Kreel
- 1.11.22 Sculpting a trap
- 1.11.23 Vader's ambush
- 1.12 Revealing the truth
- 1.13 Post-death
- 1.14 Legacy
- 2 Personality and traits
- 3 Powers and abilities
- 4 Equipment
- 5 Behind the scenes
- 6 Appearances
- 7 Sources
- 8 Notes and references
- 9 External links
- "Had he been born in the Republic, we would have identified him early. The Force is unusually strong with him, that much is clear. Who was his father?"
"There was no father. I carried him, I gave birth, I raised him, I can't explain what happened."
- ―Qui-Gon Jinn and Shmi Skywalker
Believed to have been conceived by the midi-chlorians, Anakin Skywalker was born to the slave Shmi Skywalker. Although Skywalker was born on the desert planet of Tatooine, some sources stated that Shmi and he moved to the planet when Skywalker was at a very young age. Regardless, Tatooine was considered Skywalker's homeworld. Skywalker and his mother were originally owned by Gardulla the Hutt until she lost them to the Toydarian Watto in a podracing bet when Skywalker was around age 3. Affectionately nicknamed "Ani," he worked in his master's shop, located in Mos Espa.
Even at a young age, Skywalker exhibited exceptional piloting skills, and built the protocol droid C-3PO, specially modified to withstand Tatooine's sand and heat for his mother. Once, while he was working in Watto's scrapyard, he found a broken servomotor he thought he could repair and use on the droid he was building and asked his master for it. With a glance, Watto saw that it was worthless and grunted that he could, but as Skywalker walked away, Watto told him nothing was free and had him work harder the next day. Skywalker got the photoreceptors for the droid at a market in Mos Espa. Though a Gran wanted them too and chased him through the market, Skywalker escaped by destroying an Ithorian's stall and blocking the Gran's pursuit. Before he had even turned nine, Skywalker's work had ensured 3PO was operational. He was close friends with fellow slaves Kitster Banai and Wald, as well as the elderly Jira. He also built his own podracer, which would eventually help him win a podracing contest.
At some point, Watto told Anakin to go and throw away some scrap. When looking at it, Anakin found an ultra power cell, just what he needed for his pod. Suddenly, a swoop gang with a Devaronian member attacked the streets and shot the generator for the medical center. When Anakin examined it to see if he could repair the generator he saw that it needed a power cell. So, he took his power cell and saved the medical center. A week later, Anakin participated in a pod race with Sebulba who made him lose by cheating. Anakin stated that if he would have used the power cell on his own pod, he would have won but it was more important for the medical center to receive it.
- "There's something about this boy."
- ―Qui-Gon Jinn
One day, at the age of 9, Watto shouted for him to come inside the junk shop, to find a tall man, a young woman, a Gungan, and an astromech droid, conversing with Watto. At Watto's instructions, Skywalker manned the shop while Watto took the man, Qui-Gon Jinn, into the junkyard. Skywalker was fascinated by the beauty of the young woman, Padmé Amidala, so much that he asked her if she was an angel from the moons of Iego. Shortly after Watto and Jinn returned to the shop, Jinn informed his companions that they were leaving. Fortunately for Skywalker, Watto allowed him to leave after he cleaned up the mess that Jar Jar Binks had made. As he headed home, Skywalker came across Binks, who was being attacked by Sebulba after the clumsy Gungan had disrupted the racer's meal. Breaking up the fight, Skywalker greeted Naberrie and the rest of her group when they arrived to see what was happening, and he convinced the group to follow him to Jira's fruit stand nearby. As he gave one of the pallies to Jinn, the boy was astonished to see a lightsaber on the man's waist when his poncho opened. When Jira warned the group that a sandstorm was coming, Skywalker insisted that the unprepared group come with him to his home.
When they reached his house, he introduced the group to his mother and explained about the sandstorm before pulling Naberrie into his room to show her his project. Naberrie was genuinely impressed by Skywalker's work on C-3PO, prompting him to turn the droid on, and he also told her about the podracer he was constructing. The group stayed at the Skywalkers' as the sandstorm continued to rage, and during a meal, he began to explain life as a slave, though a brief argument between Naberrie and Shmi about slavery led Anakin to the subject of podracing. Mustering his courage, Skywalker asked Jinn about his lightsaber, and he refused to believe the Jedi's statement that he was not there to free the slaves. As the conversation turned to the group's damaged Naboo Royal Starship, Skywalker volunteered to race in the Boonta Eve Classic podrace so that Jinn could get the prize money. When his mother objected, Anakin reminded Shmi of her belief that people needed to help one another, convincing her to allow Anakin to race for Jinn.
The next morning, Jinn and the others accompanied Skywalker to Watto's shop, and the boy began to tell Watto about Jinn's proposal when Naberrie stopped Jinn outside for a brief conversation. When Watto asked how Jinn intended to sponsor the boy, Jinn proposed that that his ship would cover the entry fee. Watto initially suggested they split the winnings fifty-fifty, when Jinn proposed that Watto front the cash for the entry, and keep all of the winnings minus the cost of a new hyperdrive. Watto accepted the deal, and Skywalker was dismissed immediately with instructions to check out Jinn's podracer. As Skywalker worked, his friends Banai and Wald among them, arrived, but Wald and the others were skeptical of Skywalker's chances and left to go play elsewhere, except for Banai. Despite Skywalker's warnings, Binks became caught between the podracer's energy binders, causing his face to go numb. Anakin used a power pack that Jinn had lifted from Watto's shop to start the podracer, and the group was heartened to witness the engines activating and running perfectly.
That afternoon, Skywalker sustained a cut on his arm, though he did not notice it until later that night when Jinn tended to it and took a sample of his blood. Before Skywalker could get Jinn to tell him what he was doing with his blood, his mother called him inside their house for bedtime. He then sent this blood sample to Kenobi, who found that the young boy had even more midi-chlorians than esteemed Jedi Grandmaster Yoda.
Racing to freedom
- "Remember, concentrate on the moment. Feel, don't think. Use your instincts."
"May the Force be with you."
- ―Qui-Gon Jinn advises Anakin before the beginning of the podrace.
With two eopies, Naberrie, Banai, Shmi, Anakin, R2-D2, and C-3PO hauled the podracer to the arena hangars, where Jinn had gone to meet with Watto. The Toydarian angrily left the hangar just as they arrived, confusing Skywalker with a comment about Jinn and betting, but Banai unintentionally revealed to Naberrie and the others that Skywalker had never actually finished a race, causing Naberrie to lose hope in the boy's chances.
A little while later, the racers and their pods entered the arena and lined up for the race, and Shmi stopped her son to ask him to be safe before he headed out to his racer. Not even Sebulba's threats rattled Skywalker as Jinn helped him into the podracer cockpit. But to Skywalker's dismay, when the starting light turned green, the pod's engines stalled immediately thanks to Sebulba's sabotage, leaving him stuck at the starting line with only Ben Quadinaros and his stalled racer as the rest of the competitors flew off. Realizing that he had left out one step to start the pod, he rapidly flipped switches and adjusted settings to reset the engines and succeeded in starting the engines, flying out of the arena and chasing after the others.
He soon caught up to the other racers, passing two before they even noticed him, and he prepared to pass the Troiken Gasgano as they approached Arch Canyon. Gasgano blocked his first few attempts, but Skywalker overtook him as they dropped over a short mesa and proceeded to slip into Arch Canyon quickly and without any trouble. Teemto Pagalies tried to push him into the rock, but Skywalker was able to pass him with a twist. Sebulba tossed a piece of debris behind him and into Mars Guo's left engine intake, clogging the motors inside. The engine intake stopped working before the entire engine combusted. With Guo crashing into the desert sands, Skywalker was free to move ahead, going neck and neck with Sebulba as they passed the grid line into the third lap.
Going into the third lap, Sebulba still held the lead, as narrow as it was. With Skywalker close behind, and now out of surprise tricks, Sebulba resorted to sheer brutality in order to either keep Skywalker behind him or batter the boy enough to destroy his pod. Approaching the Laguna Caves, a part of the course where Tyerell had crashed earlier, Sebulba rammed Skywalker off course, forcing him onto a steep service ramp. Boosting, Skywalker sped up the ramp at an exhilarating speed, propelling himself into the sky. The boy was quick to act and adjusted his pod accordingly, leveling his podracer's nosedive as he headed back for the ground. Not only did he save himself from an explosive wreck, but his jump off of the ramp put him directly in front of a surprised Sebulba. Skywalker continued to hold the lead until they ran into a series of archways. Suddenly Skywalker's left engine bucked and began to give off a stream of dense smoke. Sebulba's earlier sabotage was beginning to take effect as Skywalker pushed his pod to its limit. Skywalker managed to resolve his engine difficulties and quickly regained his ground, passing up several other podracers before gaining a tail on Gasgano. Although Skywalker had had issues with passing the Xexto earlier in the race, this time he swerved past Gasgano with little effort and eventually flew parallel with Sebulba as they headed for the final stretch of the course.
As they approached the arena, Sebulba blocked every attempt of Skywalker's to pass, and he finally swerved his larger racer into Skywalker's in anger at the boy's repeated attempts—only for the two racers' steering rods to be caught together. When Skywalker's rod finally snapped completely, his podracer began to shudder violently but broke free of Sebulba's racer, the engines of which shot forward and went flying out of control, slamming into rock and sand and exploding. As Sebulba's pod skidded to a halt, Skywalker shot toward the arena and across the finish line, winning the Boonta Eve Classic.
As Skywalker came to a halt, the crowd swarmed his racer. Jinn hoisted Skywalker onto his shoulders in celebration. In the hangar, Skywalker met up with his family and friends. As Jinn approached, Anakin became embarrassed at Naberrie and his mother's constant hugs and kisses, but Jinn soon departed with Binks and Naberrie to take their parts back to the ship.
Farewell to home
- "Be brave. And don't look back."
- ―Shmi Skywalker's parting words to her son
Returning home with Jinn, Skywalker ecstatically showed his mother the credits, and his happiness only increased when Jinn told him that he had been freed and Jinn wanted him to become a Jedi. Anakin was so excited that it was several minutes before he realized that Shmi had not been freed as well, and he was dismayed when Shmi insisted that Anakin go with Jinn to a better future without her. Packing his stuff, Skywalker bid goodbye to C-3PO, but when it came time to leave, Anakin's resolve broke and he ran back to his mother. He promised that he would return and free her. Despite their sorrow at parting, Shmi convinced her son to go with the Jedi.
As they raced towards the starship that Naberrie and Jinn had come to Tatooine on, Skywalker was suddenly ordered to drop to the ground and complied just as a dark-robed figure, Sith Lord Darth Maul, shot overhead on a speeder. The man leaped at Jinn, drawing a red-bladed lightsaber and attacking the Jedi as Jinn urged Skywalker to get aboard the ship and to take off. He rushed aboard, and Naberrie took him to the cockpit to tell Jinn's apprentice, Obi-Wan Kenobi, what had happened. The pilot Ric Olié followed Kenobi's instructions to fly towards the fight, and Skywalker scrambled into a seat as Kenobi raced to the landing ramp and helped Jinn escape from the dark warrior. Skywalker and Kenobi rushed to help Jinn as the ship took off and left Tatooine. When they were convinced Qui-Gon was fine, the Jedi master introduced Obi-Wan to Anakin, who was happy to meet another Jedi.
Before the Jedi Council
- "He is the Chosen One. You must see it!"
- ―Qui-Gon Jinn pleads to the Council to train Anakin.
Later that night, aboard the ship, which Skywalker learned was the personal starship of the Queen of the planet Naboo, Skywalker struggled to fall asleep in the central chamber, as the ship's temperature was radically different to the constant heat of Tatooine that he was used to. As he huddled in silence, Skywalker witnessed Naberrie enter the room and watch a recording of a plea for help from the Naboo official Sio Bibble. She then noticed him and gave him her blanket, and the two discussed the Trade Federation's invasion of Naboo and Naberrie's hopes that the Republic's Galactic Senate could resolve the crisis. Skywalker gave her a japor ivory wood pendant that he had carved for her so that she would remember him, and Naberrie comforted him as he became sad as he remembered his mother.
When they finally arrived at the Republic capital of Coruscant, Skywalker watched from the cockpit in awe as they approached the city-planet, and the ship was greeted when it landed by Supreme Chancellor Finis Valorum, Senator Palpatine of Naboo, and a contingent of Senate Guards. The Queen and her handmaidens—including Naberrie—departed with Palpatine, though they brought Skywalker and Binks along with them to Palpatine's office and left them outside while they discussed the situation.
Before he went to the Jedi Temple, Skywalker went to the Queen's chambers in search of Naberrie, but the Queen promised to pass on his message when the handmaiden was absent. Unbeknownst to Skywalker, however, the Queen was in fact Padmé.
Harboring strong premonitions he had received on Tatooine, Qui-Gon Jinn believed Anakin Skywalker to be the Chosen One of prophecy who, it was foretold, would bring "balance to the Force"; Jinn revealed his belief and Anakin's corroborative midi-chlorian test results to members of the Jedi High Council before bringing the boy before them for their consideration of the boy's aptitude for life as a Jedi. At the Jedi Temple, Skywalker faced the twelve Jedi Masters on the Council. Mace Windu tested Skywalker's abilities by asking him to determine what images were appearing on a testing screen that the Jedi was holding but that the boy could not see. Skywalker named them all with perfect accuracy. However, when Windu and Master Yoda questioned him about his feelings and his mother, Skywalker asked how that was relevant. Yoda explained that fear was the starting point on the path to the dark side. The ancient Jedi Master said he sensed a lot of fear in Skywalker.
As night fell, Skywalker, Kenobi, and Jinn were called before the Council. The Jedi Masters acknowledged Skywalker's great power but refused to train him on account of his age—causing Jinn to declare that he would take the boy on as his own apprentice. The Council would initially refuse this, as Jinn already had his own apprentice, who was Kenobi but Jinn stated that he believed that Kenobi was already ready to become a Jedi Knight. However, Windu declared that the matter would be dealt with later, as the Naboo problem was more pressing. The Council permitted Skywalker to accompany Jinn, and the three returned to the Queen's starship, where Skywalker questioned Jinn about midi-chlorians. The Queen and her retinue departed not long afterward, leaving Coruscant and heading back to the occupied Naboo in hopes of freeing the world from the Trade Federation.
First Battle of Naboo
- "Now this is podracing!"
- ―Anakin, escaping the droid control ship
As they came out of hyperspace and approached the Naboo system, Skywalker sat in the cockpit with Olié and learned about the ship's controls while Queen Amidala held a meeting with the Jedi and her staff and announced her intentions to ally with the Gungans in order to drive the Trade Federation off Naboo. The group landed in the swamps of Naboo and sent Binks to the Gungan capital city of Otoh Gunga. When Binks finally returned, he explained that Otoh Gunga was empty, but he took the group to the Gungan Sacred Place where the Gungans had no doubt fled after the Trade Federation invaded.
When the group was brought before Boss Rugor Nass, the leader of the Gungans, Skywalker was astonished to learn that Naberrie was, in fact, Padmé Amidala, the Queen of Naboo and that she had been posing as her double's handmaiden as a safety precaution. Skywalker, the Jedi, and Amidala's handmaidens joined the Queen in dropping to their knees before Boss Nass in a plea for Gungan aid, and Nass agreed to lend his army to the Queen's cause. In the hours that followed the meeting, Amidala and the Jedi began strategizing with the Gungan generals, leaving Skywalker to wander over to the Gungan sentries who were keeping watch for the returning Captain Panaka.
Anakin was a member of the group which, led by Amidala, grabbed the chance to recapture the Theed Royal Palace. When the group entered the Theed hangar bay, Skywalker heeded Jinn's command for him to stay hidden in the cockpit of one of the hangar's N-1 starfighters. When several droidekas cornered the Naboo personnel in a firefight, Skywalker attempted to aid them with the N1's blaster cannons, although he accidentally activated the ship to go into space in the process. Skywalker fought in the Battle of Naboo in a vicious starfighter battle above the planet. After accidentally joining the battle in orbit, Skywalker single-handedly destroyed the orbiting Droid Control Ship from within the ship, thus rendering the Trade Federation's ground forces inactive and saving the Gungan Grand Army from destruction. The following celebration, however, was tainted with the death of Jinn, slain by Darth Maul.
However, during the Master's funeral, Obi-Wan told him that he would fulfill Qui-Gon's last wish and train him to be a Jedi. The Naboo and the Gungans held a parade in Theed to celebrate their victory and mark their newfound friendship.
- "His education is... complicated. He came to us later than we would ordinarily have liked. Obi-Wan took on an extremely difficult task when he accepted Anakin as his Padawan."
- ―Mace Windu to Sheev Palpatine, on Skywalker's training
As he grew, Skywalker's exceptional skills made him cocky, but he nevertheless idolized Kenobi, thinking there was "no one better" than his master. During one of their many adventures, he also rescued Kenobi after he fell into a nest of gundarks. During his time as Kenobi's apprentice, Skywalker was distrustful of teachers who corrected him, wondering if they were trying to help him or simply put him in his place, knowing that many hadn't wanted him trained in the first place. He found it hard to make friends, as his fellow Padawans were all aware of the rumors of him being the Chosen One. Often lonely, he generally spent his free time in his quarters tinkering with machinery he found in trips outside the Jedi Temple. He also harbored a lingering resentment regarding the fate of his mother.
Mission to Dallenor
- "With the little kids. I'm already so far ahead of them."
- ―Anakin Skywalker
Sometime after his enrollment into the Order, Skywalker was meditating with his master while also holding together many pebbles using the Force. However, when Master Tosan informed his master that he had a mission from the Council, Anakin's concentration broke due to the surprise of him leaving again. The mission was to go to the planet Dallenor so that he could collect an ancient Jedi holocron from a dig site. Obi-Wan told Anakin that he would be back shortly and that he would be training with Yoda in the meantime. Skywalker, displeased, complained that he would have to be in the class with "little kids" and that he was far ahead of them in his training. However, he complied and spent his time with the younglings, although he didn't enjoy himself. However, after some encouragement from Yoda, Kenobi took Skywalker along with him on the mission in a T-6 shuttle.
Skywalker was glad that he was finally in space again and asked if he could pilot the shuttle. Kenobi told him that he could when they got closer to Dallenor. Skywalker asked what Obi-Wan's life was like before joining the Jedi Order. Kenobi told him that he didn't remember as he was taken in at a very young age. Anakin, sadly, expressed that he was always a Jedi and nothing else. Kenobi tried to reassure him by telling him that he still needed to train and was a Padawan when they both met. However, Skywalker was unconvinced and stated that his life was already set out for him and that he wasn't anything else, unlike him who was a slave. He concluded that this must be why the Jedi Council said he was too old to be trained. Obi-Wan tried to reassure him again by saying that the Council wasn't perfect and that Qui-Gon Jinn chose him just like he chose Kenobi. Skywalker, angered, proclaimed that Kenobi's master was dead and that now he was stuck with him. Before Kenobi could reassure Anakin, he walked away.
Upon arriving on Dallenor, Kenobi and Skywalker encountered a female Togruta archaeologist named Clatriffe. She was glad that they arrived so they could take the holocron away due to the fact that it was causing problems. She explained that the local pirates wanted to get it and she had to hire local guards to keep them at bay. Kenobi ordered Skywalker to stay outside to keep watch whilst he and Clatriffe went inside the facility to obtain the holocron. After they went inside, Skywalker noticed that the pirates had arrived.
Kenobi, Skywalker, and Clatriffe went out to meet them and were introduced to the Krypder Riders and their leader Hudso Shaku, who knew that the holocron was something important due to offworlders wanting to get it. Kenobi stated that they had come in peace but were willing to defend themselves. He activated his lightsaber, whereupon Shaku ordered his pirates to attack him because he found the laser sword to be more valuable than the things that they dug up. Kenobi quickly disarmed the pirates but, while Skywalker froze up due to the suddenness of the attack, Shaku captured him by placing his sword under his chin. He ordered a trade, the boy for the lightsaber, but was taken down by Skywalker using the Force to assault Shaku with small pebbles. With Shaku knocked unconscious and the pirates' weapons destroyed, they surrendered to the Jedi.
On the shuttle home, Kenobi praised Skywalker for his great work on his first mission. Skywalker, however, exclaimed that he froze up and wasn't ready for a mission even though he believed otherwise. Kenobi reassured Skywalker that it was he who was not ready. He asked that since he couldn't save his master from dying, how could he save his Padawan. Skywalker, with renewed confidence, stated that they would save each other and that that was what Qui-Gon would have wanted. Kenobi agreed and then recalled that Anakin wanted to fly the shuttle. Skywalker, in response, said yes enthusiastically.
A chancellor for a friend
By the time he was 12 in 29 BBY, he had built his first lightsaber; after its construction, Kenobi said to him, "Anakin, this weapon is your life." Three years after the Battle of Naboo, Skywalker sought to impress his peers at the Jedi Temple. During a training session, he defeated a training droid, which he had programmed to mimic the appearance of the Sith of Naboo. All the while, Mace Windu, Kenobi, and Supreme Chancellor Sheev Palpatine watched—the last of whom was impressed. Sometime later, Skywalker struggled to learn the skill of taming creatures when Kenobi told him that the Chancellor wanted to see him. The two arrived at his office, where Palpatine requested that Skywalker accompany him on an errand, declining Kenobi's company. Left alone, Skywalker escorted Palpatine to Club Kasakar in Level 2685, all the while listening to Palpatine express concern for the situation on the sub-surface levels of Coruscant, the inability of the Jedi to respond efficiently, and the corruption that plagued the Senate, such as Colandrus—subtly, and unbeknownst to Skywalker, marking the beginning of his influence over him. At the end of the errand, Palpatine asked if Skywalker was happy as he was. Though Skywalker answered that he was and that "training to become a Jedi [was] all [he] ever wanted," it did plant a seed of doubt in his mind.
Later, at the Jedi Temple, Skywalker confided in Kenobi that he wished to leave the Order, feeling uncomfortable at the prospect of his entire life being decided when he was only nine years old, and surrendered his lightsaber to his master. Though Kenobi took the weapon, he pleaded for Skywalker to reconsider.
Mission to Carnelion IV
- "The road lies before you, Anakin Skywalker. Will you walk it alone?"
"No, Master. As a Jedi. If you'll show me the way."
- ―Obi-Wan Kenobi and Anakin Skywalker
Before Skywalker could give his definite answer, at Yoda's behest, both student and master responded to a mysterious distress signal from the supposedly dead world of Carnelion IV that specifically called for Jedi intercession. They began their journey to the coordinates, but their shuttle was damaged due to the planet's atmospheric debris field, and the two had to eject from the doomed vessel, landing below the Celadon Sea. Not too long afterward, they came to be aware of life on the planet as a sky battle raged over them, and Kenobi returned his lightsaber to him so that he could defend himself. As one of the combatant airships began to fall, Skywalker and Kenobi saved its two-person crew by delaying the crash.
The two survivors, Kolara and Mother Pran, who identified themselves as "Open," knew nothing about what a Jedi was. They were forced to take cover when a "Closed" airship, which Kenobi fell; Skywalker saved its pilot, Grecker, from falling to his death. But due to the historical feud between their factions, Grecker and Pran tried to murder each other, forcing Skywalker and Kenobi to destroy their weapons and to escort them to safety. To facilitate their journey, they used the intact parts of each of their airships to form a new one in order to fly to their destination. During the conversations that ensued, Skywalker mentioned his and Kenobi's purpose on the planet: to find the person who had sent the Jedi distress signal, which alerted Pran and Grecker to the location of "the scavenger."
During the journey, Kolara told Skywalker about the mysterious kites, before noticing that he was good at fixing things, as he made an adjustment to his lightsaber. Kolara and Pran then had Skywalker repair a bag of droid brains and, seeing his usefulness, threw away his lightsaber and abducted him when a horde of fishers attacked the ship, leaving Kenobi alone with Grecker as the airship crashed below the Celadon Sea. Skywalker was taken to one of the Open's fortresses, where he witnessed as Pran used the processors he had repaired to activate some battle droids. As they left to wage war on the mysterious scavenger (who reminded both Open and Closed of everything they had lost and how badly they had failed), Skywalker remained with the younger Open, whom he convinced to protect the scavenger and help him get back to Kenobi.
Using their help, Skywalker fixed the remaining droids and intervened in the skirmish between the Open and Closed unfolding right next to Sera's fortress. He saved his master from Mother Pran and met with Kolara and Sera, but rather than try to stop the fight, Kenobi had Skywalker repair a communications unit and called the Republic for aid. Soon enough, a task force arrived and forced the natives to cease hostilities. In the aftermath, his master offered Skywalker his lightsaber, asking if he was still adamant about leaving the Order, but Skywalker decided to remain a member.
Rescuing Master Yoda
At some point after the mission to Carnelion IV, Skywalker was being tested by Kenobi, who was having the Padawan attempt to defend from a group of Marksman-H training remotes using a wooden stick rather than his lightsaber. When Skywalker used the Force to grab his master's lightsaber, completing the trial using it instead, he and Kenobi began to argue with one another. As Kenobi left with a team of Jedi Temple Guards, investigating a disturbance in the Force, he ordered Skywalker to remain there and clean up.
Protecting Padmé Amidala
- "Ani? My goodness, you've grown."
- ―Padmé Amidala and Anakin Skywalker
Ten years after the Battle of Naboo in 22 BBY, as the Separatist Crisis threatened to tear the Galactic Republic apart, the 19 year old Skywalker and Kenobi were involved in an important mission to settle a border dispute on Ansion. Upon their return to Coruscant, an assassination attempt on Padmé Amidala, now Senator of Naboo, prompted the Jedi Council—at the behest of Chancellor Palpatine—to send Skywalker and Kenobi to protect Amidala from future attacks. Anakin was delighted to see her after so many years; he had thought about her every day since they parted. When Padmé said she wanted to know who wanted her dead, and Obi-Wan started to explain that they were only there to protect her life, not to investigate, Anakin promised Padmé to find who was responsible, annoying Obi-Wan. When Padmé retreated to her chambers, Anakin was disappointed, claiming that Padmé hardly even recognized him; however, Jar Jar, who was a representative in the Senate during this time, said, Padmé was very happy to see him.
During that night, Anakin and Padmé agreed on a plan of using her as bait, in order to capture the assassin, much to Obi-Wan's dismay. Anakin told him that although Padmé had covered the cameras in her bedchamber, he was certain he would sense if anything were to happen in the room. Kenobi had doubts about his Padawan's power. Shortly after, when his master noticed that Skywalker was tired, he admitted that he had constant nightmares about his mother; he also revealed his powerful affection for Amidala. Obi-Wan warned him to control his emotions, saying that Padmé was a politician after all, and could not be trusted. This led the two into a debate about whether every politician, including Amidala and Palpatine, was corrupt. As Skywalker expressed his faith in Palpatine's benevolence, he sensed something in Padmé's room. He arrived just in time to cut two venomous kouhuns in half, just a few centimeters from the senator's face. Obi-Wan noticed the assassin's droid at the window and threw himself out, grabbing it.
Anakin rushed to a row of speeders parked near Padmé's apartment. When the bounty hunter Zam Wesell shot her droid down, Skywalker arrived upon the scene as his Master was in free fall. Catching Kenobi, the Padawan continued the pursuit of Wesell's airspeeder. Spotting the Jedi, Wesell took her speeder on a nosedive—plunging several meters toward the lower levels of Coruscant. With the Jedi relentlessly pursuing her, Wesell flew through the exhaust flames of the Kerdos Company recycling plant, hoping that the flames would scorch her adversaries in the open-top speeder. Seeing the pair still chasing her and unharmed by the flames, Wesell fired at the couplings of a nearby electrical plant, causing the Jedi's speeder to be inundated by electrical shock.
Skywalker, an expert pilot himself, quickly caught up to Wesell. The bounty hunter steered her craft into a network of skytunnels, aiming once again to lose the pursuing Jedi. Skywalker did not chase directly into the tunnel but opted to travel an alternate route. Wesell wove through the local network of tunnels. Anakin and Obi-Wan thought they lost her, but just a few minutes later Anakin noticed the bounty hunter's airspeeder below, and jumped out, let his body drop the intervening distance through the air, then latched a firm hand-grip to its rear canopy handle. He ultimately was forced to let go when she shot at him, although not before getting a good look at her, wherein he deduced that Zam was not only a female but also a changeling (he'd briefly glimpsed Wesell's true form when she looked up). The Jedi ignited his lightsaber and sliced at the windscreen, knocking out the guidance systems. Wesell shot the lightsaber out of Skywalker's hand, but the ensuing struggle caused Wesell to misfire her blaster pistol, damaging the control pipes. Meanwhile, Kenobi, who was behind Wesell at this point, caught Skywalker's lightsaber. The airspeeder began to plummet toward the surface, crashing near the Outlander Club. Wesell crawled from the crash site and fled into the club.
Anakin was about to follow Zam into the building when Obi-Wan stopped him, returning to him his lightsaber, reiterating, "this weapon is your life." As they headed to the Outlander, Kenobi said he had the feeling his apprentice would be the death of him. Anakin indignantly responded that Obi-Wan was like a father to him. Inside the Outlander Club, Anakin was instructed by his master to search the premises while he went for a drink at the bar. Wesell hid until the two Jedi separated, then slowly approached the seemingly vulnerable Jedi at the bar. To secure the accuracy of her shot, she continued approaching the Jedi with her weapon drawn while Kenobi, through the Force, sensed the bounty hunter's intentions. In an instant, Kenobi ignited his lightsaber, spun around, and severed Wesell's arm below the elbow.
Skywalker and Kenobi took the wounded bounty hunter and dragged her from the club, setting her in an alley behind the club for interrogation. Wesell was initially reluctant to give any information about who had hired her, replying that it had simply been a job. As Skywalker pressed her, however, Wesell prepared to divulge the information. Suddenly, a mysterious figure fired a toxic dart into Zam's neck.
Return to Tatooine
- "Ani? Is it you? Ani?"
"I'm here, Mom, you're safe."
- ―Shmi Skywalker and Anakin Skywalker
Subsequently, the Council sent the Master and Padawan on separate missions—Skywalker, on his first solo mission, would protect Amidala on Naboo, whereas Kenobi continued an investigation into Amidala's aggressors that took him to Kamino. Joined by R2-D2, Skywalker and Amidala departed for Naboo aboard the Jendirian Valley, a refugee ship leaving from the western spaceport.
While on Naboo, as he experienced inner conflict between his strong desires for her and his duties as a Jedi, Skywalker revealed to Amidala his love for her, but she refused since Skywalker was not supposed to form attachments as a Jedi, even though she felt the same for him. Skywalker was also troubled by dreams of his mother suffering, which prompted him to return to Tatooine and rescue her, to which Amidala agreed to accompany him. On Tatooine, the two located Watto, who revealed that he had sold Shmi to a moisture farmer named Cliegg Lars. The couple then visited the Lars farm only to discover that Shmi had been abducted by Tusken Raiders about a month before their arrival, and was feared to be dead. Determined to save her at all costs, Skywalker took the swoop bike of his stepbrother, Owen Lars, and searched for his mother.
Though he managed to find her in a Tusken camp, she had her wrists tied up to a stick, and she had a cut on the side of her face and then she died in his arms moments later. Consumed with grief and rage, Skywalker slaughtered the entire village of Tusken Raiders—men, women, and children. Only then did Skywalker bring his mother's body back to the homestead, where her funeral was held, and when he claimed he would become so powerful in the Force he could stop the people he loved from dying. The event left him full of pain and guilt, for failing her and failing as a Jedi, as well as haunted by the prospect of letting go of the people he loved.
First Battle of Geonosis
- "You call this a diplomatic solution?"
"No, I call it aggressive negotiations."
- ―Anakin Skywalker and Padmé Amidala
It was then that Skywalker received a message from Kenobi telling him of Separatist presence on Geonosis, which they retransmitted to Coruscant so that the Jedi Council could see it for themselves. Upon learning he had been captured, Skywalker and Amidala departed for the planet, where they entered one of the factories (where his lightsaber was destroyed) but were subsequently captured and placed with Kenobi into the Petranaki Arena to be executed by beasts. However, the trio managed to avoid the creatures (in Skywalker's case, a reek), only to be surrounded by droidekas on Count Dooku's orders.
However, a Jedi assault team, led by Mace Windu, arrived to rescue them. Nevertheless, they fought a losing battle against an overwhelming amount of Separatist forces, including the B2-series super battle droids, until Master Yoda arrived with the newly established Grand Army of the Republic and safely boarded the survivors of the arena—including Skywalker, Kenobi and Amidala—onto LAAT/i gunships. As the battle raged between the clone army and the Separatist Droid Army, they caught sight of Dooku; though Amidala and a clone trooper were knocked from the troop bay by a cannon blast, Skywalker and Kenobi continued to pursue the Count to a secret hangar, where they engaged him in a duel.
Both were defeated, and though Kenobi suffered minor wounds, Skywalker lost his right forearm. It was then that Yoda arrived and fought Dooku until the Sith Lord made his escape on his solar sailer. The battle had proven to be the start of the Clone Wars, and Skywalker received a cybernetic replacement for his lost arm. While Kenobi returned to Coruscant, Skywalker accompanied Amidala to Naboo, where they were secretly married, their sole attendants being their faithful droids R2-D2 and C-3PO. As he still needed to recover from the Battle of Geonosis, Skywalker was able to remain on Naboo for sometime, enjoying his honeymoon and time after it with Amidala.
The Clone Wars begin
General of the 501st
- "You fought in the Clone Wars?"
"Yes. I was once a Jedi knight, the same as your father. […] He was the best star pilot in the galaxy and a cunning warrior. […] And he was a good friend."
- ―Luke Skywalker and Obi-Wan Kenobi, on Anakin Skywalker
Skywalker was knighted to fight in the war, and he became a General in the Grand Army of the Republic during the galaxy-spanning Clone Wars. The 501st Legion was under his command during much of the war effort, his "first-in-command" often being Clone Captain CT-7567, who was also known by his nickname "Rex." While at first Rex needed to adapt to his maverick Jedi General because of the Clone Captain's by-the-book and no-nonsense nature, Rex would come to admire, and even would sometimes emulate, Skywalker's willingness to bend the rules and genius for improvisation, and Skywalker and Rex would even become friends.
The Venator-class Star Destroyer Resolute served as his personal flagship, under the admiralty of Wullf Yularen. He also built a new lightsaber to replace the one lost in Geonosis. During the war, Skywalker cut B1 battle droid R0-GR down on a number of occasions. Years later, after R0-GR met C-3PO and learned the protocol droid had been built by Skywalker, he thought this fact practically made him and the 3PO unit family.
At some point before he received a scar over his right eye, Skywalker participated in the Battle of Arantara. During the battle, Rex was wounded and rendered unconscious. After being found by Skywalker, Rex was surprised to see that he had come back for him, as acts like that were not extremely common amongst the Jedi. Skywalker responded that it should have been him in his place, telling his captain that a true leader always led from the front.
Battles at Corvair sector and Kudo III
- "…Let's finish this."
- ―Anakin Skywalker
Skywalker later led several of his bombers and fighters against the Separatists in the Corvair sector. After defeating the separatist fighters, Skywalker spoke with Admiral Yularen aboard the Resolute. Yularen confirmed that the Separatist contingent came from the droid foundry on Kudo III. Skywalker agreed to attack the foundry quickly before Separatist reinforcements arrived. However, Skywalker did not approve of the attack's high casualties that included the Kudon. Yularen suggested that they should do a surgical strike on the foundry's generator.
Skywalker spoke with Master Kenobi about his plan for attack, who reminded Skywalker to trust his feelings and the Force. Skywalker took R2 with him aboard his interceptor and made his way to Kudo. After Skywalker landed, he made his way into the foundry and saw the Kudon being used as slave labor. Skywalker fought the battle droids and freed the Kudon. Skywalker was able to convince the Kudon to arm themselves and fight the battle droids. The mission was a success, and Skywalker returned to the Resolute.
Siege of Hisseen
Sometime later, the Jedi Council sent Skywalker along with Kenobi and Jedi Master Plo Koon along with their respective battalions to the besieged planet of Hisseen in order to stop a Separatist victory on the planet. While protecting a village from oncoming droid forces, the clones required backup before Skywalker, Kenobi, and Koon arrived to rescue them. The three jumped into combat as Koon used the Force to push several droids into one another, destroying them. After a short battle with the droids, the Republic emerged victorious over that wave of droid forces. With this, Skywalker deactivated his lightsaber and met with Commanders "Wolffe" and "Cody" as well as Captain Rex regarding the Hisseenian parliament as well as a Hisseenian premier who was to meet with Count Dooku and Asajj Ventress, which could potentially lead to Dooku dissolving the government on Hisseen and allow him to control the planet. With this, Kenobi informed the clones that they would need to hold that position while the three went after Dooku and Ventress. With that, the three Jedi left to confront Dooku and Ventress. Meanwhile, Rex told a story about him and Skywalker during a mission on Benglor.
Battle of Christophsis
- "You're reckless, little one. You never would have made it as Obi-Wan's Padawan… but you might make it as mine."
- ―Anakin Skywalker to Ahsoka Tano, following the Battle of Christophsis
Skywalker and his former master, Kenobi, were tasked by the Jedi Council to break the Separatist blockade on Christophsis, and assist Alderaanian Senator Bail Organa on his relief effort on the planet's surface. Initially overwhelmed, Kenobi presented Skywalker with a Republic stealth ship prototype with a cloaking device and tasked him with flying it past the blockade, in order to deliver supplies to Organa. Accompanied by Yularen, Skywalker chose instead to engage Separatist Admiral Trench directly and divert his attention from Organa on the surface.
De-cloaking his stealth ship, Skywalker launched torpedoes at the Providence-class Dreadnought Invincible, but his missiles were repelled by the ship's powerful thermal shields. After successfully evading Trench's return fire, Trench sent a message over an open frequency, warning that he had faced this kind of ship before and that they should retreat before they were destroyed. Using the information supplied by Kenobi, Skywalker surmised that Trench would lock onto the ship's magnetic signature to destroy it and so, Skywalker de-cloaked once more, firing another volley of missiles at Trench's dreadnought. Trench took the bait and locked onto the stealth ship's magnetic signature, firing several tracking torpedoes. Skywalker then steered the ship straight at the Invincible, scraping right past its hull before Trench's own missiles slammed into the bridge. As Trench had just fired the missiles, his ship's shields were still recharging, and the dreadnought was destroyed. After defeating Trench, Skywalker delivered the supplies to Organa.
After breaking the blockade, Kenobi joined Skywalker and the rest of the Republic forces on Christophsis' surface and together, they planned an ambush on the advancing droid army; instead, they were ambushed and forced to evacuate. Aware of a possible with a traitor amidst them, the Jedi duo decided to go behind enemy lines in order to seek information, leaving Captain Rex and Commander Cody to find the traitor. On the suspiciously empty Separatist headquarters, Skywalker and Kenobi ran into Asajj Ventress, whom they dueled before flying two STAPs back to his base. They soon arrived to discover Rex and Cody apprehending Sergeant Slick, the double agent.
As the battle raged, Skywalker's squad and the rest of the Republic forces managed to force the Separatists into a temporary retreat, but the need for reinforcements was evident. Instead, a young Togruta girl, Ahsoka Tano, arrived to relay Master Yoda's message for them to return to Coruscant for a new mission, presenting herself as Skywalker's new Padawan, much to his dismay. The impending Separatist threat made it impossible for them to leave their post, so Skywalker and Tano (whom Skywalker nicknamed "Snips") went behind enemy lines to destroy their droids' deflector shield generator while Kenobi stalled for time by holding a fake surrender negotiation with General Loathsom. Despite having to fight a few droids that protected the generator, the two managed to destroy it, allowing the Republic army to finish off the droids and win the battle. Only then did Skywalker and Tano find common ground, and he accepted the responsibility of mentoring her.
Battle of Teth
- "So, this is where the fun begins."
"Race you to the top."
"I'll give you a head start."
- ―Ahsoka Tano and Anakin Skywalker
As Yoda arrived with reinforcements, Skywalker, Kenobi and Tano were informed that Jabba Desilijic Tiure's son Rotta had been kidnapped, and Skywalker and Tano were to go to Teth to search for the Huttlet, whereas Kenobi would speak with Jabba on Tatooine.
With a time limit of only one planetary rotation to deliver Rotta, Skywalker and his Padawan landed in Teth, where they were flanked by battle droids. Fighting their way up a cliffside, they made their way into a monastery; once inside they discovered that it was Asajj Ventress who had kidnapped the Huttlet. With considerable effort, the Master-Padawan pair seized Rotta and escaped aboard an abandoned G9 Rigger-class light freighter, the Twilight.
They saw that help had arrived and planned to take the Huttlet to one of their Star Destroyers for help, as he had gotten sick. Unfortunately, the cruiser was destroyed, forcing them to take Rotta to his father on their own. Upon arriving on Tatooine, they were attacked by MagnaGuards and, though they defeated them, the Twilight crashed, forcing them to travel through the desert. Choosing to split up in the Dune Sea, Tano took Rotta to Jabba's Palace, whereas Skywalker was confronted by Count Dooku. After a brief duel, Skywalker stole Dooku's speeder bike, knowing his Padawan was in trouble and reached Jabba's Palace, where he was told that Rotta had not been delivered and that he would be killed. Just then, Senator Amidala contacted the Hutt crime lord and informed him that his uncle Ziro was involved with the kidnapping, just for Tano to arrive along with Rotta, resolving matters to Jabba's satisfaction.
- "That's your plan? Just fly there, land, hope they don't spot us and walk in the door?"
"Oh. Brilliant. Let's get going."
- ―Obi-Wan Kenobi and Anakin Skywalker
When news reached them of the destruction of Jedi Master Plo Koon's fleet in the Abregado system, Skywalker and his Padawan set out to rescue him and any survivors in spite of his orders to rendezvous with Kenobi's fleet. Though he sent his ships and most of his men, Skywalker himself and Tano used the Twilight to rescue Koon and three other clones, who were able to tell them of a new Separatist superweapon, the Subjugator-class heavy cruiser Malevolence, which was commanded by General Grievous.
After yet another attack from the Malevolence, Skywalker decided to lead the Shadow Squadron into an attack against the heavy cruiser, only to narrowly escape the Malevolence's ion cannon, which left too many bombers destroyed or incapacitated. Forced to change the plan, Skywalker and the bombers dropped their payload on the ion cannon, forcing it to overload, damaging the ship and causing the Malevolence to retreat from its attack on a Republic medical station. While making his escape, Grievous captured Senator Amidala, who entered the system in the belief she was sent to negotiate with the InterGalactic Banking Clan Supreme Executive, rather than a trap. Ordering their ships to halt their fire, Skywalker and Kenobi boarded the Malevolence to rescue her. While on the ship, Skywalker sabotaged the ship's navigation system to cause the ship to crash into a moon should the hyperdrive be engaged, before escaping the ship alongside Amidala and Kenobi.
Following the battle wherein a group of clones from Rishi Station prevented a surprise attack on Kamino, Skywalker and Kenobi awarded medals to two of its survivors, newcomers Echo and Fives, with Skywalker welcoming them onto the 501st Legion.
- "So let me get this straight, Anakin. You risked the mission, all your men, even your Padawan, to save a droid?"
"Artoo found the listening post, and he saved our lives. We couldn't just leave him there, Obi-Wan."
"Oh, Anakin, one day…"
- ―Obi-Wan Kenobi and Anakin Skywalker
Following numerous Separatist victories from General Grievous, and the defeat of the Falleen battle group, Skywalker attempted to stop the cyborg from taking his sector and planned an ambush for the Separatist forces as they were passing through Bothawui's asteroid field. Placing AT-TEs on the nearby asteroids, he managed to destroy the Separatist frigates and forced Grievous to retreat in the Soulless One, resulting in a pursuit by Skywalker. However, debris from the destroyed Separatist frigates damaged his ship, leaving him to be rescued by Rex at the cost of losing R2-D2. Though he was supplied with a new astromech droid, R3-S6, Skywalker was saddened by the loss of his friend and did not take to the new droid, and felt something suspicious on its true allegiance. Instead, he launched a search, scouring the battlefield; unable to find R2-D2, they boarded a nearby scavenger ship, the Vulture's Claw, only to leave empty-handed as Gha Nachkt delivered R2-D2 to Grievous.
With all hope lost, Skywalker attempted to continue life without the droid, scouting for a possible Separatist listening outpost, until R2-D2 sent a message revealing his location at Skytop Station. Upon arrival, Skywalker ordered Tano and Rex to fulfill the mission objective—to destroy the station—while he went to find his lost droid. Though Skywalker engaged several MagnaGuards, he found R2-D2 and met up with Rex and Denal, who told him that Tano was gone to distract Grievous alone while they completed the mission. It was then, as Anakin already suspected about R3-S6's true allegiance, that R3 revealed himself to be Grievous' spy and set several vulture droids and super battle droids against them. As they resisted, Tano rejoined the group, only to be scolded by her master for engaging the droid general alone; R2-D2 opened the hangar doors, defeating R3-S6 in the process, to be retrieved by a happy Skywalker, delighted to have his longtime friend back safe.
Following Viceroy Nute Gunray's capture in Rodia by Amidala, Skywalker separated from Tano, who went onto serve as Gunray's escort alongside Luminara Unduli. Although the two failed in their task, Skywalker reunited with Tano at the rendezvous point.
Captured on Florrum
- Skywalker: "You should be more patient, Master. After all, the Count is an elderly gentlemen, and doesn't move like he used to."
- Kenobi: "I suppose you're right."
- Dooku: "I would kill you both right now if I did not have to drag your bodies."
- ―Skywalker and Kenobi mock Dooku as the three attempt to escape [src]
Together with Kenobi, Skywalker spearheaded an attempt near the planet Vanqor to capture Count Dooku, where Skywalker let himself be captured by Dooku's Munificent-class star frigate and taken to a prison cell, only for Kenobi to come and rescue him. The two Jedi then gave chase to Dooku, who escaped in his solar sailer, with a Sheathipede-class transport shuttle. After taking direct hits to their shuttle, they were forced to crash-land on the planet. In a nearby cave, the two Jedi began to hunt for Dooku, but the Sith Lord ambushed them by causing a sudden collapse in the cave ceiling. While Dooku escaped the cave, they had to render a gundark unconscious, only to nearly succumb to poison gas released from a trapped pocket in the cave. They were saved just in time, as Tano and a detachment of clone troopers rescued them.
Later, as Supreme Chancellor Palpatine and his representatives were contacted by Hondo Ohnaka to receive a reward for capturing Count Dooku, Skywalker and Kenobi were assigned to verify the pirate gang's custody of Dooku, agreeing to the pirates' condition to arrive unarmed. The Jedi were met at gunpoint in the Twilight and escorted to Ohnaka, who arranged a meeting with their prisoner. The Jedi mocked Dooku's imprisonment, and the Sith Lord warned them not to underestimate the Weequay. Skywalker and Kenobi were invited to a "party" by the pirates, only to wind up passed out in a cell, chained together with Dooku. Despite several attempts by the Jedi and Sith to escape on their own, Representative Binks was the one to rescue them, though the mission came at the cost of Senator Kharrus' life and Dooku's escape. Obi Wan told Anakin not to harm Hondo and left peacefully.
Quell and Maridun
- "This battle is inevitable. You can stand by your beliefs, but let us stand by ours."
- ―Anakin Skywalker, to Tee Watt Kaa
Sent in as reinforcements for Jedi Master Aayla Secura's and Commander Bly's forces, which were heavily outnumbered and overpowered during the Battle of Quell, Skywalker, Tano, Rex, and their forces assisted in an evacuation of Secura's cruiser as it fell under heavy Separatist fire. Meeting with Secura, a raging inferno ran through the cruiser, and Skywalker sacrificed himself to save the others, severely injuring himself in the process. Tano and Secura dragged Skywalker onto the evacuation frigate, where he was given medical treatment for his injuries. As they prepared to dock with the Resolute, an ambush by several vulture droids caused the ship's hyperdrive to activate, sending them into deep space. After narrowly avoiding an incoming star, they crash-landed on Maridun, where Skywalker was left in the care of Rex, while Secura, Tano, and Bly set out to ask the natives for medical support. Rex defended Skywalker from several vicious mastiff phalones until Tano arrived back with Bly and Lurmen healer Wag Too, before a final confrontation against the vicious attackers.
Soon after their arrival, Separatist forces landed on the planet, and the Lurmen leader Tee Watt Kaa accused the Jedi of bringing the war to their peaceful planet, ordering them to leave immediately. Though they did, the Jedi returned to the Lurmen village after learning about the Separatists' sinister objective—to test their new superweapon, the defoliator, on the Lurmen. The group set up a shield generator to protect the village from the blast of the weapon, as well as from the incoming waves of battle droids. As their shield was destroyed and the defoliator was being reloaded for another shot, Skywalker disabled the weapon before capturing Separatist General Lok Durd. The Jedi then left the planet, now peaceful again, on several Republic cruisers sent by Yularen.
- "...and this is the planet's tropical zone."
"It's not Tatooine, that's for sure."
- ―Obi-Wan Kenobi and Anakin Skywalker, on Orto Plutonia
After losing contact with a Republic outpost on Orto Plutonia, Skywalker, his droids C-3PO and R2-D2, and Kenobi were sent to investigate with a squad of cold assault troopers under the command of Captain Rex, in the company of Pantora Senator Riyo Chuchi and Chairman Chi Cho. Skywalker and Kenobi investigated the outpost following the mysterious death of all its clone troopers, and the two Jedi deduced that all the clones had been killed, but not by battle droids since another nearby Separatist base had also been attacked. Skywalker and Kenobi followed their clues to a nearby canyon, where they found a village inhabited by Talz, who explained that they were only trying to protect their home as translated by C-3PO. Acting as a mediator, Kenobi proposed a peace meeting between the Talz and Chairman Cho, but the latter refused to share the moon with the Talz, and declared war, despite the Jedi's efforts to bring forth peace. As a battle broke out amongst the clone troopers and the Talz, Senator Chuchi convened with the Pantoran Assembly and called Cho out of order. The battle came to an end when Cho was killed, and Chuchi gave a proposal to the Talz to share the moon with them.
Blue Shadow Virus
- "You must move cautiously if you—"
"There's no time for caution. My Padawan is trapped on there, and so is Padmé—I mean, Senator Amidala."
- ―Gregar Typho and Anakin Skywalker, much to Kenobi's disapproving look
Upon Amidala's petition to send Skywalker and Kenobi to assist them in locating suspected Separatist presence on Naboo, Skywalker, Kenobi, and Tano arrived to find that Amidala and Binks had gone to investigate the eastern swamps. Sending the young Padawan with Peppi Bow to find them, the two Jedi were informed by Captain Gregar Typho that before losing contact with Amidala, she had informed them of the laboratory's location and of Dr. Nuvo Vindi's intentions to release the dangerous Blue Shadow Virus back into the galaxy. While Tano led an attack on the southern entrance, providing a distraction for Kenobi and Skywalker to enter through the hatches undetected, Skywalker confronted Vindi, who electrified Amidala and Binks to make his escape. After saving the Senator, Skywalker pursued the scientist, capturing him with the help of Peppi Bow and Kenobi on the swamp above.
Prepared to transport Vindi to Theed for his trial, they heard an alarm go off below them and Skywalker contacted Tano; she told him that Vindi's servant droid had set off one of the viral bombs, liberating the virus, and that she along with the clones were trapped in the laboratory, just like Amidala was. Once in Theed, Captain Typho told the two Jedi that they had found a possible antidote for the virus, a reeksa root, but that it could only be found on the planet of Iego. Despite Typho's warnings that it was suicide, Skywalker set off alongside Kenobi aboard the Twilight.
Upon arrival, Skywalker and Kenobi were greeted by a group of inoffensive B1-series battle droids that had been reprogrammed to do the bidding of a local boy, Jaybo Hood; he told the Jedi that the planet was protected by a deity known as Drol, who would not let any who arrived on the planet leave again, but also instructed them on how to retrieve the reeksa roots. Though the plant attacked them, they obtained the root and bid farewell to Hood before taking off, only to be forced to turn back after encountering a laser web, the work of the Separatists. On their second attempt, however, they used Hood's reprogrammed vulture droids, and Kenobi managed to shoot the laser generator, liberating the inhabitants of Iego. Skywalker and Kenobi then arrived in time to rescue their friends on Naboo.
Battle of Ryloth
- "It was a trap, Snips. It wasn't your fault."
"I lost so many of my pilots."
"Take heart, little one. That's the reality of command."
- ―Anakin Skywalker and Ahsoka Tano
During the Battle of Ryloth, Skywalker gave Tano command of a squadron to fend off Mar Tuuk's blockade to make way for Kenobi's ground assault, encouraging Tano to overcome her nervousness about leading her first squad. However, during the battle, she disobeyed her master's orders and lost many men, for which Skywalker reprimanded her when she arrived back at the Resolute, yet understood her good intentions. Skywalker then reported his losses to Windu and Kenobi. He gave her some time to recover but informed her that they needed to proceed with the attack on the blockade, which upset Tano because he was rushing the plan despite their recent losses. Though he told her to go cool off somewhere, Skywalker had an idea—he evacuated the damaged Defender, which he would pilot by himself into the Ryloth system to distract the Separatists, while he gave Tano full command of the attack operation. By the time Turk realized the ruse, it was too late, for Skywalker had already escaped in an escape pod and let the Defender collide with Tuuk's control ship; though Tuuk escaped, Tano destroyed the Confederate fleet, and Skywalker was rescued from his escape pod.
After Kenobi and his men were able to take out the proton cannons and allow the transports to land, whereas Windu headed for Lessu with his forces, Skywalker and his forces secured the space around Ryloth, forcing the remaining Separatist cruisers to flee. He reported this in a holographic conference with Chancellor Palpatine, Yoda, Admiral Yularen, Senator Orn Free Taa, and Windu. However, Separatist General Wat Tambor soon deployed Hyena-class Droid Bombers to destroy Ryloth's villages and Skywalker engaged them in his interceptor, accompanied by Tano and clones. Before Lessu was destroyed on Count Dooku's orders, Skywalker and Tano shot them down. Subsequently, Tambor was captured, and the Republic was victorious: Ryloth was finally free once more.
- "This could be a trap, Master. Are you sure you don't need us to go?"
"Of course it's a trap, Skywalker."
- ―Anakin Skywalker and Mace Windu
Skywalker and Clone Commander "Wolffe" fought alongside each other during the Battle of Khorm, where the Clone Officer lost his right eye to Ventress. Sometime later, during the First Battle of Felucia, Skywalker, Tano, and Kenobi fought against the Droid Army, but, while Tano was away on a jungle patrol, Skywalker, Kenobi, and their clones were surrounded. However, a Republic fleet commanded by Wolffe was able to break past the Separatist blockade, so Skywalker and the others could be evacuated by Master Plo Koon. However, Tano refused to retreat, and Kenobi and Skywalker went to retrieve her before her forces were overrun by droids. While Skywalker and Tano argued about the retreat, as Tano believed the droids were retreating, she boarded the gunship in time, and the three Jedi watched as her abandoned vehicles were destroyed. Back at the Jedi Temple, Skywalker attempted to take the blame for her disobedience, citing that he had given her more freedom due to her skills. Still, the Council relegated her to guard duty in the Jedi Archives to reflect on what she had done.
When Yoda sensed that thieves would arrive at the Temple, Skywalker, and Kenobi inaccurately deduced that their enemies were after their transmission codes and went to secure them, only to be proven wrong when they located the intruders' position at the ventilation shaft. They were misdirected then to the communication center, where they narrowly escaped an exploding Todo, and realized only too late that Cad Bane had stolen a holocron from the Vault. Furthermore, the bounty hunter that was assisting Bane, Cato Parasitti revealed that Bane's next target was Bolla Ropal, keeper of the Kyber memory crystal, which contained a list of all known Force-sensitive children in the Republic. Skywalker then volunteered himself and Tano to meet with Ropal, arriving in the Devaron system to cut off the Separatist fleet that was assisting Bane, who already had captured Ropal and tortured him to death in a containment field after he defiantly refused to open the holocron.
Skywalker, Tano and Rex boarded Bane's Munificent-class frigate and stormed its bridge, where R2-D2 accessed the ship's computer to locate Ropal, or rather, Ropal's dead body. After an explosion rocked the ship, the Jedi spotted Bane and chased him into a trap. After a duel with Tano, the bounty hunter took her as a hostage, and Skywalker was forced to bow to Bane's demands and open the holocron. Though he did so, Skywalker also pulled his and Tano's lightsabers to himself and attacked Bane. However, Bane distracted him by opening the airlock on Tano's cell and escaped, while Skywalker saved his Padawan and made their way to the hangar, where troopers had stolen a shuttle the escape the exploding Separatist ship back to the Resolute, not before letting Bane enter, disguised in trooper armor. After landing on the Resolute, Rex later noticed Duros blood in the shuttle, and pursued Bane, who nevertheless managed to escape in a V-19 starfighter. Skywalker and Tano returned to the Jedi Council to report their failure.
Skywalker, along with Kenobi, Windu and Yoda, meditated in hope of finding the children that Bane was after before he kidnapped them. Sensing the future, Skywalker and Tano were assigned to Naboo to set a trap for Bane in Jan-gwa city, capturing him as he attempted to kidnap Roo-Roo Page. With the real child safe, the two Jedi took Bane to the Resolute, where Skywalker, Windu, and Kenobi interrogated the bounty hunter with a combined mind trick; exhausted, Bane gave them coordinates that Kenobi and Windu were to follow, while Skywalker reported the details to Palpatine on Coruscant. Soon, however, he reunited with his Padawan and R2-D2 and began to examine Bane's Starfighter, from which Skywalker and Tano deduced from the ashes on it and its refueling record that Bane had been to Mustafar. With nothing else to do, the Jedi pair left on the Twilight for the planet, where they found the children. Though one of the droids set the building to be destroyed in the lava on Sidious's orders, Skywalker and Tano saved the children and returned to Coruscant. Skywalker admitted to the Council that they were unable to find out who was behind the kidnappings, to which Yoda advised caution on the path ahead.
Battle of Felucia
- "That's it. We'll just train the villagers to defend themselves."
"But we are just simple farmers. Why are we paying bounty hunters to defend us if we're just going to end up doing it ourselves? Hush."
"Trust me. We'll have you ready."
- ―Anakin Skywalker and Dilanni
On a mission to investigate the disappearance of Felucia Medical Station HCTFF2 that was orbiting over Felucia, their shuttle was attacked by a group of six vulture droids deployed from an automated deployment station, forcing them to crash-land on Felucia. Trapped on the planet, they came across a nysillin farm village after searching around for a while. They soon realized that the Felucian villagers were being protected by a group of bounty hunters led by Sugi—Embo, Rumi Paramita, and Seripas. The village elder, Casiss Midagatis, explained to the Jedi trio that they had hired the bounty hunters because pirates had been taking their crops. After some debate amongst them, Skywalker, Kenobi, and Tano decided to help the farmers to defend themselves.
That night they were visited by the pirates, Hondo Onaka's gang, familiar to Skywalker and Kenobi. Ohnaka then told the group that he would be back, but by then Skywalker had taught the Felucians how to fight with staffs—though slow at first, they eventually picked up the craft. After a few days, the Ohnaka Gang returned as promised, and a skirmish ensued between the factions. During the confrontation, Skywalker dueled Ohnaka and his electrostaff, leaving him hanging off a cliff and begging for mercy, to which the Jedi Knight pulled him up and Ohnaka realized that their efforts were no longer profitable, leaving on his ship. Alongside the bounty hunters, the Jedi themselves left soon after as well, to reach the closest Republic outpost.
The Zillo Beast
- "Well, you made the right choice. We got the fuel and you saved your creature. And now, he will be safe."
"Let's hope we could say the same about Coruscant."
- ―Anakin Skywalker and Mace Windu
During the lengthy campaign on Malastare, Skywalker discussed with Palpatine (via hologram) and Windu the effects of the new electro-proton bomb, just as the Separatist Droid Army prepared a new attack—with the Republic expecting to successfully defend the Dugs and secure a treaty for their fuel. Though exceedingly effective, the bomb created a crater, which Windu went to investigate whereas Skywalker was to ensure the treaty with Doge Urus, only to be called by Windu to assist him with the scouting. The two soon discovered a gigantic creature whose armored skin was impervious even to lightsabers, the Zillo Beast, from which they fled, only to be told by Urus that they wanted it killed, even though it was previously thought to be extinct. With the use of RX-200 Falchion-class assault tanks, the Republic forces put the creature to sleep, convincing the Dugs that it was dead. With the treaty signed and Malastare now a member of the Republic, Palpatine ordered that the beast be shipped to Coruscant for study, despite Windu's objections.
After the Zillo Beast was brought to the Republic capital, Kenobi and Amidala asked Skywalker to speak with Palpatine about the fate of the creature; reluctantly, he agreed. When both he and Amidala met with the Chancellor, Palpatine and the Vice Chair Mas Amedda tried to justify that killing the beast was for the greater good—Amidala objected to their claims, but Skywalker chose to stay neutral, instead of opposing either his wife, Amidala, or his friend, Palpatine. Although Palpatine claimed that he wished to kill the beast, he in fact wanted to research it as he was intrigued by the durability of the Zillo beast's armour. However, the beast escaped from captivity in Dr. Boll's laboratory and directly targeted the Chancellor himself for his attempts to kill it. Cornered by the beast, Skywalker and the others evacuated his office on his executive shuttle, only for the beast to grab it upon take-off. They were freed when Skywalker sliced the shuttle in half, causing everyone to fall out of the shuttle, with Skywalker saving Amidala from falling from the Senate Building's roof. The Beast was ultimately killed when gunships fired gas at its mouth on Palpatine's orders.
No end in sight
- "Wait. Now give me back my disk."
"Don't worry, Clovis. It's good to know you have a heart. I wish I could give you the disk, but I have a lot of faith in your survival skills."
- ―Rush Clovis and Anakin Skywalker
Even as the Clone Wars continued with no end in sight, Skywalker was allowed a leave after a long tour of duty. After returning home to his wife's apartment for a romantic evening, Skywalker was recalled to the Temple by the Jedi Council. Believing Senator Rush Clovis to be a Separatist supporter, they decided they needed a spy—in this case, Senator Amidala, of whom Clovis was an old friend. The next day, Skywalker met Amidala in the Senate and asked her about Clovis, who initially refused to do it until she heard that Clovis could be a Separatist. Skywalker accompanied her to the Jedi Council, where the Masters encouraged her to find out about his possible treachery. After learning that he was planning to go to Cato Neimoidia, Skywalker dressed as the pilot of Padmé's starship and took them there, all the while frustrating Clovis's attempts to get closer to his wife.
During the mission, Skywalker and R2-D2 waited for Amidala to give them a signal; when she did, Skywalker sneaked into her quarters, where he saw Amidala and Clovis embracing. Though it prompted a surge of anger and jealousy in Skywalker, she discretely showed him the disk she had stolen from Clovis and gave it to Skywalker, after which the Jedi retreated. It was soon after that the poison that Amidala had been given by Lott Dod began to set in, and she passed out. After Dod revealed to Clovis she was a spy, he helped Skywalker take her back to their ship, back to Coruscant, and forced Dod to give him the antidote, only for Skywalker to leave Clovis behind, stranded on the planet.
Second Battle of Geonosis
- "I knew they were still alive. I told you not to give up on them."
"It's not that I gave up, Skywalker, but unlike you, when the time comes, I am prepared to let my student go. Can you say the same?"
- ―Anakin Skywalker and Luminara Unduli
Immediately after routing Separatists near Dorin, Skywalker and Tano were sent to participate in the Second Battle of Geonosis, alongside Kenobi and Ki-Adi-Mundi, as the Republic returned to destroy the Geonosian primary droid factory. Intending to make a three-pronged attack against the shield generator, Skywalker, Tano and the 501st Legion set out to attack the Separatist defense lines from the south to reach the rendezvous point—with only Kenobi's forces arriving at the landing zone, as both Mundi's and Skywalker's transports were shot down and forced to make their way to Kenobi's position by foot. Though they encountered resistance, Skywalker's team met up with Mundi's forces. After contacting Yularen to deploy a squadron of BTL-B Y-wings to help them, they reunited with Kenobi and his company, where they planned the assault on the shield generator.
They then improvised on their plan; leading the charge, Skywalker and Tano disabled the enemy cannons with EMP grenades, enabling the AT-TEs to destroy the shield generator; as the gunships arrived, the Geonosians in the area surrendered. Though Mundi and Kenobi left for medical treatment, the Republic forces continued pushing towards the massive droid foundry, and Skywalker and Tano were joined by Luminara Unduli and her Padawan, Barriss Offee, who met as Skywalker and Tano angrily discussed Skywalker's lack of trust in Tano's dependability. As Offee and Tano were sent into the Geonosian catacombs under the factory to plant explosives, Unduli realized that Skywalker was unable to let go of Tano and put her at risk, rather than distrusting her. Nevertheless, the two Jedi generals went onto distracting the droid army by marching straight to the factory and engage the enemy.
As Poggle the Lesser had his super tanks deployed, Skywalker and Luminara left their men behind and destroyed the bridge, only to learn that their Padawans had not returned yet. Cornered by droids coming from the factory, Skywalker was contacted by Tano and she apologized, uncertain that she and Offee would survive their ordeal, before using a super tank to destroy the factory. Refusing to let his Padawan die, Skywalker ordered to have them found; Unduli, however, told him that he needed to let go of his attachment to her if she were to be dead. Fortunately for them, Skywalker was contacted by Tano; after locating them, they rescued the two Padawans.
Sending Tano and Offee to recover out of the battlefield, Kenobi and Mundi returned to join in the clean-up of Separatist forces. For her part, Unduli left in search of Poggle before he could escape, when a sandstorm broke out. Forced to wait until the storm lifted after her last contact, Skywalker and Kenobi went to Unduli's last known location, the Progate Temple. Entering the catacombs below, not only they discovered undead Geonosian warriors, they also encountered the captive Unduli, Poggle and the Geonosian Queen, Karina the Great. Setting up their men to surround the Queen and her brethren, Skywalker and Kenobi tried to negotiate with Karina, for Kenobi wanted to know how the undead warriors were created. After discovering her use of parasitic brain worms), they freed Unduli, captured Poggle and fled from the Queen, with Rex and Cody burying the Queen in her lair.
With Poggle in Republic custody, the four Jedi generals prepared to deliver him to Coruscant, while they sent Tano and Offee on a mission to transport medical supplies from a medical station near Ord Cestus to Mace Windu on Dantooine. Unbeknownst to them, one of the troopers, Scythe, was infected with one of the Queen's brain worms and boarded their Pelta-class frigate, the TB-73, forcing the two Padawans to fend off the infected clones. When the ship failed to report in as scheduled, Skywalker believed there to have been a complication, and was proven right when Tano contacted him to tell him about the situation.
Angered, Skywalker went to Poggle's cell on his own and told the guard troopers to leave them alone. He demanded that Poggle answer his questions with a mind trick, but the archduke informed him that it would have no effect on a Geonosian like him. It was then that Skywalker resorted to physical violence, attacking the captive Geonosian; with Poggle still unwilling to talk, Skywalker gave in to his anger and began to Force choke him. Only then did Poggle tell the Jedi Knight, through a translator droid, that the worms were affected by the cold. Skywalker relayed this information to his Padawan, telling her through her comlink to rupture the cooling system. Thanks to his advice, Tano was able to defeat the worms as they reached the medical station. Skywalker rushed to her encounter, where he consoled Tano on her doubts about sparing her friend's life.
- "Where there is Kenobi, you will always find Skywalker not far behind."
Following the capture of Jedi Master Eeth Koth in the Outer Rim, General Grievous sent a holo-transmission to the Jedi Council, in which Grievous stated that he did not care about the Jedi's politics, nor their Republic, concluding that he lived only to see them all die. As Kenobi decoded Koth's hand signals that told them of their location at the Saleucami system, Skywalker, Kenobi and Adi Gallia were dispatched on a mission to rescue him. As a distraction, Admiral Yularen and Kenobi engaged Grievous's forces over Saleucami, with Kenobi allowing the Surrogator to be boarded by Grievous. Discreetly, Skywalker, Gallia, Rex and a group of clone troopers would execute a hyperspace jump into the system in an ambassador shuttle that would bring them right alongside Grievous's cruiser.
Once they boarded it, Skywalker and Gallia made their way to the stern of the cruiser, where they encountered a T-series tactical droid with a group of BX-series droid commandos. The two Jedi destroyed all the droids and rescued Koth, with Skywalker taking the injured Koth back to the shuttle. When Kenobi reported that Grievous had defeated him and escaped, Gallia left them to help Kenobi flank Grievous and capture him once and for all. Unsuccessful in their endeavor, Skywalker picked the two up at the hangar with their shuttle, only to leave for the Resolute, where he waited while Kenobi conducted a search mission for Grievous on the planet below alongside Cody, Rex and other troopers.
Sometime later, Skywalker and his Padawan spearheaded a mission to Coruscant's underworld to apprehend Car Affa, an arms dealer selling Republic weapons to the Separatists. When they arrived at a cantina where Affa was hiding, Skywalker instructed Tano to wait outside while he apprehended the fugitive. The confrontation, however, caused a crowd to leave the bar at once—during which Tano lost her lightsaber, which prompted her to seek the help of Jedi Master Tera Sinube when they went back to the Temple, as she didn't want Skywalker to find out she had lost her weapon.
- "What will you do? If you shoot me, you prove yourself a hypocrite to every pacifist ideal you hold dear. And you, Kenobi, you are no stranger to violence. You'd be hailed as a hero by everyone on this ship— Almost everyone. Come on, then. Who will strike first and brand themselves a cold-blooded killer?"
- ―Tal Merrik, to Obi-Wan Kenobi and Satine Kryze, before being killed by Skywalker
Following allegations that Mandalore had allied with the Separatists, and Kenobi was sent to the planet to speak to his old friend, Duchess Satine Kryze, Skywalker joined them to escort the Duchess on her journey to Coruscant aboard the Coronet. On the ship, Skywalker and Kenobi told their men to be on alert, when Kryze requested their presence before her, and Skywalker correctly surmised that Kenobi had strong feelings for her just as his former master told him of their past together. When R2-D2 picked up readings in the cargo hold, the two generals were informed by Rex, and Skywalker went to investigate—only to be attacked by assassin probes. After destroying two of them, Skywalker informed Kenobi that there might be a traitor on board the ship, and Skywalker returned to sweep the hold in search of more.
After Kenobi lured the traitor out, Tal Merrik, and Skywalker destroyed another probe, he helped search the Coronet for Merrik and Kryze, now his hostage, until several B2 super battle droids sent by the Death Watch boarded the ship. Leaving Kenobi to save his "girlfriend," he destroyed the droids and then went to find Kenobi, who like Kryze, hesitated to kill Merrik; Skywalker, however, had no such compunctions and impaled Merrik, branding himself a "cold-blooded killer," to retrieve the Senator's detonator before he could destroy the ship. With no further complications, they arrived at Coruscant; as Kryze complimented Kenobi, Skywalker noted that she was quite the remarkable woman. Following the Mandalore Defense Resolution, Skywalker and Kenobi escorted Amidala to a meeting with the Chancellor in which he thanked her, but also apologized to Kryze, before leaving Kenobi and Kryze alone.
Trapped on Vanqor
- "That kid destroyed an entire cruiser trying to get to you, and you're just gonna let it go?"
"Is there something else I should be doing, Skywalker?"
"How about tracking him down?"
"So I should behave as this child does. I should seek revenge."
"No. How is it revenge if you stop this kid and bring him to justice?"
- ―Anakin Skywalker and Mace Windu, on Boba Fett
Preparing to rendezvous with a Republic frigate, Skywalker, and Mace Windu traveled aboard the Endurance, on which they greeted a squad of clone cadets, with an infiltrated Boba Fett among them. After Fett sabotaged the ship and everyone had to evacuate in escape pods, including himself before being rescued by Bossk and Aurra Sing on the Slave I, Skywalker and Windu rescued the missing cadets' damaged pod. As the survivors were being transferred to medical frigate, the two went to the Endurance's crash site, where they searched for Admiral Kilian and any other survivors. As the bridge appeared relatively intact, they resolved to enter the wreckage, even with R2-D2's misgivings, which prompted Windu to chastise Skywalker for encouraging individuality in his astromech.
Leaving R2-D2 and R8-B7 to scan for life forms, Skywalker and Windu entered the bridge to find the survivors executed, with Skywalker noticing a Mandalorian helmet. With Windu correctly surmising that it was bait set by Boba Fett, he saved Skywalker from taking the full brunt of the explosion set off by touching the helmet. Now trapped under the rubble, the wounded Skywalker and the unconscious Windu were soon found by R2-D2, whom Skywalker told to call the Temple for help. As they waited for the astromech to come back, Windu told Skywalker why Fett wanted him dead: he sought revenge for killing his father, Jango, during the first battle of Geonosis.
As the Endurance began to collapse, they were rescued by Tano, Plo Koon, and a clone squad, thanks to R2-D2 delivering the message at the Temple itself. After spending time in a bacta tank at the Temple, Skywalker urged Windu to track Fett down and bring him to justice. The Jedi Master did not agree, until Koon and Tano showed them a message from Fett and Sing, with hostages—one of them, Ponds, killed in cold blood by Sing. Though Windu decided to go, Koon said that he would take the mission, alongside Tano, since both Windu and Skywalker were still recovering from their injuries. As they arrived on Coruscant with Bossk and Fett in custody, Skywalker was present as Fett apologized for causing so much destruction, but claimed he would never forgive Windu for killing his father, before they were taken away to the Republic Judiciary Central Detention Center.
- "I hope this assignment wasn't too boring for you."
"Ah, it had its moments."
"Huh, like the one where you convinced untrained children to help you overthrow a corrupt government?"
"That was a highlight."
"It sounds pretty risky. You're lucky you didn't get hurt."
"Nothing you wouldn't have done."
- ―Anakin Skywalker and Ahsoka Tano
Following his wife's mission to discover a conspiracy on Mandalore, Skywalker and Captain Rex escorted Tano to her solo mission on Mandalore to instruct cadets at the Royal Academy of Government at the behest of Duchess Kryze and the Jedi Council. Upon their arrival at Sundari, Skywalker presented Tano to the Duchess and Prime Minister Almec. Before leaving to join with Kit Fisto, Skywalker took his Padawan's lightsaber to respect Mandalore's laws. After Tano exposed Almec's black market operation, Skywalker reunited with his Padawan, to whom he returned her lightsaber.
Back in the Jedi Temple, the Jedi Council congratulated Tano on her courage and strength, but also ordered Skywalker to command the Third Legion on Balith to give assistance in their civil war. Told by the Council to stay behind so she could give them her full report, Tano pleaded to Skywalker to let her come along, but he told her that she should use this time in the library to prove him wrong about his assertion that she learned more on the battlefield than in the Temple, before leaving for Balith with Rex.
Skywalker returned to Coruscant to greet, along with Yoda, his Padawan, Amidala and Bail Organa after the Alderaan Refugee Conference, during which Tano captured Aurra Sing. Wondering who would pay for Amidala's assassination, Yoda had Tano use her improved precognitive abilities to find out who was behind the assassination attempt. With her description, Amidala realized who it was—Ziro the Hutt. Skywalker and his Padawan then went to the Judiciary Detention Center to question Ziro, who was tricked by Tano into confessing that he had hired Sing for the job. Satisfied, Skywalker and his Padawan then left the Hutt to his misery.
Battle of Kamino
- "I suppose you expect me to surrender."
"Actually, I plan to let the clones execute you. Right now."
"Not this time."
- ―Asajj Ventress and Anakin Skywalker
Forewarned by the destruction of Rishi Station and an intercepted transmission between Asajj Ventress and General Grievous, Skywalker and Kenobi traveled to Kamino to warn Shaak Ti and Prime Minister Lama Su of an upcoming Separatist attack, with Rex, Cody, Echo, Fives, and the rest of the 501st Legion in their company. Shortly, Grievous's fleet arrived and Skywalker led the Republic space forces, scoring several serious hits against the enemy. On the planet below, Tipoca City was attacked by Trident-class assault ship and AQ-series battle droids, prompting Kenobi to recall Skywalker to the city. Soon after returning, Skywalker engaged Ventress, who had stolen the prime DNA sample of the clones' template, Jango Fett. With the aid of clone trooper platoon, Skywalker recovered the sample from Ventress, but she, like Grievous, managed to escape yet again.
The blockade of Pantora
- "Should you really proceed without the Council's approval?"
"We do it all the time. Don't we, Snips?"
- ―Amidala, Skywalker and Tano discuss the kidnapping of Papanoida's daughters
Skywalker was later informed by his apprentice that Pantora Chairman Papanoida's daughters had been kidnapped. Knowing that the Jedi couldn't get officially involved, he slyly gave her permission to rescue them due to "personal concerns"; this turned out to be successful, with both daughters being safely returned to their father.
- "Young Skywalker… Not so impressive without your lightsaber, are you, Jedi?"
- ―Cad Bane to an unconscious Skywalker
Supposed to be on a meditative retreat, Skywalker spent some time with his wife on her apartment, observing as Amidala anxiously arranged a party for Senator Aang, who held the deciding vote on the Military Oversight Committee. Skywalker tried to ease her mind, telling her that the party would work out and that she should relax, when they saw C-3PO being fuzzy about the arrangements. At Amidala's request, Skywalker sent the protocol droid and R2-D2 to buy the jogan fruit that the latter had forgotten to buy for Aang's favorite dessert, jogan fruitcake. Although they were delayed, Amidala nevertheless hosted the party all the same, with her and Skywalker waiting for the two droids to come back—who did so just in time to present the cake to Senator Aang.
Not too long after, Skywalker went to the Senate Building to convince Amidala to go away together for two weeks, to a faraway place where no one would recognize them, so that they could actually be husband and wife, instead of Senator and Jedi. Amidala, however, rejected the idea, for she was preparing an important bill for the Senate. Skywalker retorted that the bill seemed more important than their love, but Amidala countered that it wasn't, just that they both lived to serve the Republic. However, Skywalker stated that there was nothing more important than the way he felt about her, and proved it by giving Amidala his lightsaber, which, Kenobi had told him once, was his "life." Though she believed he was teasing her, Skywalker was sincere about his feelings, and the two shared a kiss.
They were soon interrupted by C-3PO and Senator Organa's voices, prompting Skywalker to hide under her desk and Amidala to hide his lightsaber in her sleeve. As she went to the lobby to attend a meeting about the Enhanced Privacy Invasion Bill, only to be taken hostage along with several other Senators by Cad Bane and his team. Following her, Skywalker saw the situation, when Bane spotted him and sent his henchmen to capture him, but Skywalker avoided them long enough to contact Palpatine and defeat an IG-86 sentinel droid empty-handed, before being shocked into unconsciousness by Robonino and Aurra Sing and brought before the Senators. After the bounty hunters planted bombs that would go off if their laser detectors were triggered and left the building, Skywalker woke up and Amidala returned his lightsaber. He then used it to cut a hole in the floor, dropping all the senators one floor down into safety, just before Bane triggered the bombs and escaped alongside the now-freed Ziro.
Meeting Madam Synata
- "I'm still not convinced this trip is a good idea, Anakin..."
- ―Padmé Amidala
Following the crisis, Skywalker went with Amidala to Caamas to board legendary actress Madam Risha Synata's private ship. However, they were late to see Madam Synata's play about Darth Krist-Ov. After they arrived, Skywalker and Amidala met Synata. Skywalker agreed to see her museum, despite Amidala's reluctance. Skywalker took Amidala to her room. The next day, Skywalker and Amidala went to the museum. There, Skywalker and Amidala saw a display of Varykino, where they exchanged their vows. Skywalker and Amidala came under attack by several robots from the displays. Skywalker fought them off and helped Amidala escape them. Skywalker and Amidala then discovered a Separatist banner and a hologram of Count Dooku.
Skywalker and Amidala discovered that Synata was collaborating with Dooku and the Separatists. Skywalker then took one of the Separatist agents while Amidala discovered a list of anti-Separatist senators. Skywalker and Amidala discovered that along with Amidala, Synata planned to kill them with Dioxis gas. Skywalker and Amidala fought several LEP servant droids to stop Synata from killing the senators. With assistance from R2-D2, Skywalker and Amidala reached the theater.
As Amidala told the audience to get out, Skywalker borrowed a mask and helmet from an actor. He confronted Synata, who had her own real lightsaber. Skywalker fought Synata until he held at the end of his lightsaber. Skywalker and Amidala then gave their report about their trip to the Jedi Council.
One day, Skywalker was waiting with Master Yoda in the Jedi temple grounds for Ahsoka Tano. Once she arrived, Skywalker reprimanded her for being late, but Yoda praised her for helping out and proceeded to extend her Padawan braid. Following a debate in the senate about a financial reform bill, Skywalker was asked by Amidala to persuade the Jedi Council to speak with Palpatine about denying the continuation of the war. Skywalker allowed Tano to go with Amidala in order for her to learn more about politics. After an apparent Separatist attack, Skywalker confronted his apprentice about her and Amidala's meeting with Onderon's senator Mina Bonteri on Raxus Secundus and how foolish it was. Despite that, Skywalker's apprentice learned that politics were not as black and white as she thought.
- "Warrior-like men, witches—this place has all kinds of fun."
- ―Anakin Skywalker to Obi-Wan Kenobi, on Dathomir
One year and eight months or so into the Clone Wars, Skywalker and Kenobi commanded Republic forces in a battle against Asajj Ventress's fleet in the Sullust system. Directly participating of the battle in their starfighters, Kenobi was singled out and attacked by Ventress, whose Ginivex-class fanblade starfighter was, in turn, disabled by Skywalker. As Kenobi and Ventress crashed in the hangar of the Separatist command ship, Skywalker soon landed to assist his former master; together, the two Jedi engage Ventress in a duel. They were interrupted, however, by the destruction of the ship, secretly ordered by Count Dooku. The two Jedi fled in their interceptors, presuming Ventress to be doomed.
After the massacre on Devaron, Skywalker and Kenobi were sent to Dathomir, as footage had shown the Council of a Dathomirian's role during the attack on Devaron. Once on Dathomir, they made their way to a village, where they were ambushed by the Nightbrothers until Skywalker took their leader hostage; the Zabrak then told the Jedi that a Nightsister had taken one of them to their fortress, prompting the Jedi to go there. Skywalker and Kenobi questioned Mother Talzin, who told them his name—Savage Opress—and whereabouts. The two Jedi then headed to Toydaria where they confronted Opress, but failed to stop him from killing King Katuunko. Using the king's ship as theirs was destroyed, Skywalker and Kenobi caught up with their target on Dooku's Separatist flagship; however, Opress managed to overpower them, forcing the two to retreat and leave the ship.
Personal and wartime conflicts
- "You are the Chosen One. You have brought balance to this world. Stay on this path and you will do it again… for the galaxy. But beware… your heart…"
- ―The Father's last words, to Anakin Skywalker
When the Jedi Council received a 2,000-year-old Jedi distress signal, Skywalker along with Kenobi and Tano were sent by the High Council to the Chrelythiumn system, where they were supposed to meet up with Captain Rex and an armed cruiser. Though they both made it to the rendezvous point, neither Rex's nor the Jedi's ship could see each other. In fact, the Jedi's ship was guided to a mysterious planet, Mortis, where they met by a mysterious figure called the Daughter, who asked Skywalker if he was "the one" and who wanted to lead them to the Father, when Skywalker was separated from Kenobi and Tano, and the Daughter.
Skywalker tried to follow her, only to reach the monastery, where he met the Father and was given shelter for the night. As he tried to sleep, the figure of his mother, Shmi, appeared before him and encouraged him to tell her of his pain and guilt—that he was too late to save her, and that he had failed as a Jedi and that he had failed her, having tasted only vengeance when he slaughtered so many to avenge her death. But, as he mentioned his wife, who he claimed was "everything" to him, the figure finally revealed itself to be the Son, briefly assuming a monstrous appearance before disappearing.
Shaken by the encounter, he confronted the Father, who told of his family's history, and wondered if he was truly the Chosen One. Though Skywalker dismissed the prophecy as a myth, the Father arranged a test to see whether the Jedi Knight was fit to fulfill his destiny. Ordering his children to kill Tano and Kenobi, the Father goaded Skywalker into choosing between his master and his apprentice, but Skywalker instead controlled the two beings, bringing them to their knees. Having proved himself to be the Chosen One, the Father pleaded with him to stay, but Skywalker refused, leaving with Tano and Kenobi on their shuttle.
They were interrupted when the Son kidnapped Tano, prompting Skywalker to pursue him, at the cost of damaging their ship near Son's cathedral. Despite Kenobi's reservations, Skywalker went after his Padawan and climbed the tower to find Tano, corrupted by the dark side. Skywalker fought her, soon to be joined by Kenobi, only to be interrupted by the Father's arrival. Kenobi tried to hand Skywalker the Dagger of Mortis, but Tano grabbed it and gave it to the Son, who killed her, for she was no longer useful; the dark side user then mortally wounded his sister as she stepped in to save her Father. Skywalker begged the Father to save Tano, and the dying Daughter used Skywalker as a conduit to channel the last of her life force into Tano, resurrecting her. The Father told them to leave the planet before the Son used their ship to do so.
The ship's repairs forced them to stay a bit longer, though, and Skywalker went to the Father for guidance. On their meeting, the Father was determined to kill Son, but refused Skywalker's offer of aid, telling the Jedi Knight to look inside himself for the answer for what was to be done. Leaving him, Skywalker encountered the Force spirit of his first mentor, Qui-Gon Jinn. Though Skywalker sought his advice, Jinn advised him to remember his training and trust his instincts, and to go to the Well of the Dark Side to face his most personal challenge. There, the Son forced Skywalker to confront his future, one consumed by the dark side. Horrified, Skywalker submitted to the Son as he promised him the power to avert this destiny. Soon, Kenobi arrived, and Skywalker left him trapped at the well, claiming to have seen the truth—that it was the Jedi who would stand in the way of peace.
Skywalker arrived as his Padawan disabled the ship and went to rescue Kenobi, while the Son went to steal the Dagger. As Skywalker waited, the Father appeared before him and recognized that his son had broken the rules of time; he wiped Skywalker's memory of these future visions, leaving him unconscious, and brought him to his monastery. Skywalker awoke to find the Father, Kenobi, and Tano, moments before the Son arrived with the Dagger. To end the conflict, the Father impaled himself to distract his Son, while Skywalker killed the Son with his lightsaber. As the Father also died, he warned Skywalker to be wary of his feelings as they would lead to his downfall, and the three Jedi were transplanted back to the galaxy to finally rendezvous with Rex. They would later report this encounter to the Council, with Skywalker even mentioning that he had spoken with Jinn to Yoda.
- "I'm not sure what to think of your new ally."
"Well, I think we need people like him. This is a war. If we aren't willing to do what it takes to win, we risk losing everything we try to protect."
- ―Obi-Wan Kenobi and Anakin Skywalker, on Wilhuff Tarkin
Following the capture of Jedi Council member Even Piell by the Separatists, Skywalker and Kenobi were briefed by Master Plo Koon and sent along with their team—which included Rex, Cody, Echo and Fives—to infiltrate the Citadel on Lola Sayu to retrieve Master Piell, who held the information on the Nexus Route. Refusing to let Tano risk her life on such a dangerous mission, Skywalker devised a strategy to bypass the lifeform scanners of the prison; the whole team underwent carbon-freezing and were transported to the Citadel by Commander R2-D2 and his reprogrammed battle droid squadron.
After landing, Skywalker was thawed out and he found, to his surprise, that Tano had disobeyed orders and followed him. Forced to take her along, the team made its way to the facilities, leaving the astromech to guard their shuttle. After free-climbing to the entry point through a cliff wall blasted by a strong gale and littered with electro-mines, and after Tano deactivated the ray-shield on the entrance, the team was able to enter, except for Charger, who fell to his death and alerted the prison staff, led by Osi Sobeck, of their presence. Inside, they lost Longshot, but finally made it to Master Piell, whom they freed and who told them they needed to rescue his officers.
Despite the many traps laid through the fortress, the team rescued the officers, when they met the other carrier of the Nexus Route coordinates, Captain Wilhuff Tarkin. The team was split into two—while Kenobi's team created a diversion, Skywalker would lead the others away. In Tarkin's company, Skywalker and his team escaped through the cavern system below the prison, when Tarkin expressed some skepticism about the Jedi's plan, to which Skywalker told Tarkin that he reserved his trust to those who understood gratitude. However, they soon found common ground, for they both believed the Jedi Code prevented the Order from going far enough to achieve victory in the ongoing war, and Tarkin developed a grudging appreciation for Skywalker.
As they made their way out of the fuel line to rendezvous with R2-D2 and the shuttle, they were attacked by droids and forced to join Kenobi at their pick-up point, with the shuttle heavily guarded. During the skirmish, Echo tried to defend the shuttle, but its destruction and subsequent explosion seemingly killed him. As they ran into the cave system, Skywalker and Kenobi contacted the Council, telling them they needed to escape, and Koon immediately departed to pick them up. They contacted the Council again to be informed of the extraction point; as they proceeded to the location, Sobeck sent anoobas after them. The creatures claimed Master Piell's life, who passed his intel on to Tano, and the group took a moment to honor his death. Ultimately, they got to the extraction point on time, and fled on Plo Koon's rescue shuttle, with Saesee Tiin's fleet covering them to allow their escape back to Coruscant.
- "When I was out there, alone, all I had was your training and the lessons you taught me. And because of you, I did survive. And not only that, I was able to lead others to survive as well."
"I don't know what to say."
"I do. Thank you, Master. "
"You're welcome, my Padawan."
- ―Ahsoka Tano and Anakin Skywalker
Skywalker, Tano, and 501st forces fought on Felucia alongside Plo Koon and his clones in taking out a reinforced Separatist outpost. Breaking their forces into three groups, Skywalker and Rex's team were responsible for attacking the front gate and destroying the tactical droid, TZ-33, securing the outpost together with Koon and Tano's teams.
However, Skywalker then noticed that Tano had disappeared during the battle, and ordered a perimeter sweep. Skywalker had his men search around the outpost, to no avail several times over. Master Koon then informed that he had alerted all forces throughout the Outer Rim and assured Skywalker that she would be found eventually, but also firmly told him that their mission on Felucia was finished and that they had to return to Coruscant. However, Skywalker refused to abandon her, to which Koon observed his emotions were clouding his judgment. Skywalker countered "I will not leave her fate up to others." Koon insisted, "It's time to go." Only then did Skywalker comply and call everybody in to leave the planet.
Back at the Temple, Skywalker relentlessly searched for possibilities in the star charts, which prompted Koon to suggest that he should trust in Tano's abilities. Following the events on Wasskah, Skywalker's search for his Padawan came to an end when she arrived to the Temple on the Halo, in company of her Wookiee allies and the younglings O-Mer and Jinx. Upon seeing her, Skywalker profusely apologized for all that happened, heavily blaming himself for his apparent inability to protect her. Tano, however, assured him that his instruction gave her the skills necessary to survive and thanked him for his guidance. The two bowed to each other in newfound mutual respect under the delighted eye of Master Yoda.
Battle of Horain
- "Stand down! It's General Kenobi. And it looks like he's bringing a new friend."
- ―Anakin Skywalker
Sometime later Skywalker participated in the Battle of Horain, alongside Kenobi and Rex. Skywalker was contacted by Rex, who was requesting assistance, though he was already preoccupied with a group of Vulture Droids. Skywalker later met Kenobi and Rex in disbelief, noticing they had hijacked an AAT alongside faulty battle droid Bats.
Skirmish on Retta
On Retta, Skywalker ambushed a group of B1 battle droids alongside Grand Master Yoda. Skywalker was soon attacked by Kreeda, a Segredo who was attempting to scare the Jedi away. However, Kreeda soon became friendly to the Jedi, as she was an old friend of Yoda. When Skywalker attempted to recruit Kreeda as a spy, the Segredo left, and Skywalker and Yoda were attacked by battle droids soon after. After being separated with Yoda, he met the Jedi Master and Kreeda again, the latter of whom explained she was protecting refugees of the Clone Wars. Using a hat from one of the individuals she was protecting, Skywalker pretended to be using the "cloaking cap" to distract General Flebek, allowing Yoda to take out a B1. Believing there was no secret to invisibility and that it had been a trick, Flebek fled the area and boarded her ship. Upon asking what his report would entail, Yoda told Skywalker that he would tell Mace Windu there was nothing of interest on Retta.
Battle of Mon Cala
After the assassination of King Kolina of Mon Cala and new discord in the fragile peace between the Mon Calamari and the Quarren, Skywalker and Amidala, sent as representatives of the Republic, arrived to the planet at the behest of Captain Gial Ackbar of the Mon Calamari Guard and protector of young Prince Lee-Char, but so did Riff Tamson, Separatist ambassador. Though Skywalker and Amidala tried to mediate between the parties, the Quarren left the council hall, dissatisfied with the Mon Calamari rule. Along with Ackbar, they contacted Yoda and Windu, who dispatched a company of clone troopers equipped for underwater combat under the command of Kit Fisto and Tano.
In the meantime, during the Quarren attack assisted by Separatist aqua droids, Skywalker and Amidala accompanied Lee-Char, who in turn was bodyguarded by Ackbar. He engaged the Quarren soldiers until he was recalled by his wife to help Senator Meena Tills, while leaving Tano to cover the prince and rescue him from Tamson. As the first Separatist/Quarren assault came to an end, Skywalker reunited with Amidala, Tano, Fisto, Ackbar, Lee-Char, and Tills to await the second assault, this time assisted by the Hydroid Medusas, which proved incredibly effective against the Republic-Mon Calamari army. Forced to retreat into the caves below, they regrouped to decide their next course of action—to retreat to the surface, only return to the sea floor as their frigate was destroyed and they were attacked by more enemies.
They split into two groups: Skywalker went with his wife, Ackbar, and Tills, whereas Fisto, Tano, and two troopers accompanied the Prince. Expecting Republic reinforcements to come soon, Skywalker and his group proceeded to the Mon Calamari central planetary scanner facility, where the Jedi Knight collapsed the entire structure with the Force, rendering planetary defenses blind to upcoming Republic reinforcements—the Gungan Grand Army, and Representative Binks, sent at the behest of the High Council. However, Tamson used Trident-class assault ship to create whirlpools, disorienting the Republic-Gungan forces, and though Skywalker managed to destroy one of them, all but Tano and Lee-Char were captured.
Brought before Riff Tamson, Skywalker and Fisto were restrained by electric eels, whereas Amidala and Jar Jar Binks were imprisoned within containment devices, interrogating the two Jedi about the whereabouts of Prince Lee-Char. During the interrogation, Tamson attempted to force them to talk by biting a tiny hole into Amidala's helmet, allowing her suit to fill up with water. However, Tamson left to see the located Prince in person, Skywalker and Fisto used the Force to remove the water from her helmet, while Binks used his saliva to seal the puncture, saving her from drowning. The four were soon taken to witness Prince Lee-Char's execution, in which Nossor Ri, the Quarren leader, saved the prince at the critical moment and turned his people against the Separatists, resulting in the victory of the Mon Cala people. With the peace restored, Skywalker and his friends were present for the coronation of Lee-Char, now recognized by both Mon Calamari and Quarren as their new monarch.
- "Padmé, I'm sorry."
- ―Anakin Skywalker, after being traded for Grievous
Following rumors that the Gungans planned to aid the Separatists in an attack on Theed, Skywalker accompanied Amidala to Theed and later, to the Gungan territory near Lake Paonga where they met with Binks, who confirmed the troubling rumors. He took the couple to Otoh Gunga, where they spoke to Boss Lyonie, and realized he was under the influence of a mind-controlling necklace, which Skywalker telekinetically snatched, making him recover; Lyonie told them that new minister, Rish Loo, had given it to him.
Skywalker, Amidala, and Binks assisted Lyonie as he confronted Loo, only to face droid commandos, and for Lyonie to be stabbed by Loo before the minister's escape. Taking the Boss to an infirmary, the couple noticed the uncanny resemblance between the unconscious Lyonie and Binks, who they convince to impersonate Lyonie and cancel the Gungan assault on Theed. As he did so, uncovering Loo's deception to the army, Skywalker pursued the fugitive minister to a trap set by Count Dooku in Loo's laboratory. As Dooku killed Loo and revealed his secret input in the Battle of Naboo, Skywalker dueled the Count, only to be overwhelmed by Dooku's powers and his four MagnaGuards.
Dooku then contacted Amidala and offered an exchange—the Jedi Knight for General Grievous, who had been captured by the Gungan Grand Army, thanks to Gungan General Tarpals's sacrifice. An hour later, Skywalker was brought and handed over to Amidala, Queen Neeyutnee and the Gungans, while Grievous was allowed to remain free.
Battle of Umbara
- "Does my battalion have to do everything?"
"You seem to always volunteer."
- ―Anakin Skywalker and Obi-Wan Kenobi
During the campaign on Umbara, Skywalker and Kenobi discussed their attack strategy against the Umbaran capital city, which was being defended by Confederate and local militia forces. Together with Rex and Fives, Skywalker prepared to repel enemy reinforcements striking against Kenobi's joint attack with Jedi Masters Saesee Tiin and Pong Krell, who would be supporting Kenobi from the south whereas Skywalker and 501st Legion would advance from the north.
Amidst heavy fire, Skywalker and his battalion made it to the landing site, and then to a ridge which they used as a staging area. As he and Rex awaited the rest of their men, hoping to move out soon and reinforce General Kenobi's battalion, Dogma reported that all platoons had reported in, and Skywalker told him to get some rest. Dogma replied that he was fine, but Rex told him it was a direct order, prompting Dogma to do as he was told. As Rex observed Dogma was "wound tight but loyal," Skywalker joked that he reminded him of Rex, who disagreed, saying that was him in the old days.
Shortly after this, the Umbarans ambushed Skywalker and his troops, but an airstrike by Master Krell and Odd Ball saved them. After the quick save, Krell approached Skywalker with a disconcerting message: the Council had ordered Skywalker back to Coruscant, effective immediately, as requested by Supreme Chancellor Palpatine, for reasons unknown. Though reluctant to leave his troops in the midst of battle, Skywalker was forced to relinquish command over his troops to Master Krell and make the journey back to Coruscant. Despite Krell's efforts to sabotage the Republic effort by tricking the 501st and the 212th battalions into attacking each other, Kenobi was successful in taking the capital and routing the remaining Umbaran forces, securing all sectors of the planet for the Republic.
After ten rotations of Yoda's last contact with the Togruta colonists on Kiros, Skywalker, Tano, Captain Rex, Commander Cody, and Kenobi departed to liberate the world from the Separatists. After landing, suspicious of the lack of colonists in the town, they used BARC speeders to break through the city and surround the governor's tower, used as the Separatist Headquarters. The enemy commander, Darts D'Nar, then sent a message to Kenobi to discuss terms of surrender. Skywalker then took the holoprojector out of Cody's hand and called D'Nar "Zygerrian scum." Though Skywalker wanted to deal with the slaver himself, Kenobi told him to locate the missing colonists while he negotiated. As Skywalker contacted Admiral Yularen to conduct a planetary bioscan to find them, Kenobi explained Skywalker's behavior to Tano.
Overhearing from Kenobi's negotiations that D'Nar had planted bombs throughout the city, Skywalker and Tano set out to disarm them. Despite sniper droids, they destroyed the bombs in the nick of time, just for Kenobi to tell them D'Nar was escaping on the Tecora. With some effort, they managed to board the ship, inside which D'Nar pitted a blixus against them, but Skywalker managed to throw it off the ship, while Tano bested D'Nar in the cockpit. Soon, Skywalker joined her and, with frightening intensity, threatened the Zygerrian into revealing the colonists' location, much to Tano's surprise. However, it proved effective as D'Nar revealed that his Queen would hold the Royal Slave Auction.
- "A most curious Jedi who cares more about his friends than his own mission. Hero. General. And now, my servant."
- ―Miraj Scintel
When Skywalker, Kenobi, Yularen, and Tano told the Jedi Council of their findings, they were tasked with locating the colonists. On the Tecora, and disguised as Zygerrian, they land on the capital city of Zygerria; splitting into two teams (Kenobi and Rex went to located the colonists), Skywalker and Tano went to meet Queen Miraj Scintel, with Skywalker posing as "Lars Quell" and bringing news of Bruno Denturri's supposed death, and presenting Tano as a present. He quickly won Scintel's favor, with the Queen inviting him to accompany her during the slave auction, where she intended to have Skywalker prove himself a slaver by torturing Kenobi.
Instead, he freed Kenobi and tried to escape with R2-D2 returning their lightsabers, Rex providing cover fire and Tano confronting the Queen. Despite their efforts, however, they were subdued, but Scintel saw Skywalker's determination, for five electro-whips were needed to reduce him. Despite Dooku and half her kingdom demanding his death, Scintel had Skywalker brought to her quarters. There he woke up and interrogated Scintel about his friends' whereabouts, while he throttled the Queen with the Force. However, Scintel gasped that his friends would die unless he obeyed her, and Skywalker was forced to comply and become her bodyguard and escort, just as she became infatuated by him.
After a few days, Dooku would arrive, and Skywalker observed that she too was a slave to the Count, before she left to receive the Sith Lord. With the help of R2-D2, he escaped his guards and freed Tano from her cage and sent her to prep the ship, while he interrogated Scintel to tell him Kenobi and Rex's location. However, he found himself before Atai Molec, who had betrayed Scintel, and Dooku, with whom Skywalker futilely dueled before Dooku blamed him of killing Scintel before her guards. Skywalker then took Scintel and escaped to the Tecora, aboard which she told him Kenobi was in the Kadavo system and that she, just like Skywalker, was a slave, before dying.
After contacting Plo Koon to send reinforcements, Skywalker and Tano soon reached Kadavo and entered the slave-processing facility. During the battle that ensued, Skywalker disabled the turrets that were attacking Koon and his forces, while Tano saved the Togruta colonists from falling to their death (as caused by Keeper Agruss) by placing Admiral Barton Coburn's Arquitens-class light cruiser Hand of Justice underneath the facility. Along with Rex and Kenobi, Skywalker evacuated the facility before it was destroyed on Koon's orders, before returning to the rest of Koon's fleet.
- "Skywalker, a powerful Jedi you are, yet unpredictable and dangerous you can be, to both your friends and enemies. For Obi-Wan, on your patience, everything depends."
- ―Yoda, to Anakin Skywalker
After the capture of Moralo Eval, rumored to be the mastermind of a plot to kidnap Supreme Chancellor Palpatine, Skywalker, Tano and Kenobi were recalled to an emergency meeting by the High Council while they walked through the nightly streets of Coruscant. On their way to the Temple, however, a sniper opened fire at them, which prompted the three Jedi to chase their aggressor. However, the sniper killed Kenobi before escaping on a speeder, prompting Skywalker to return to his master, to find Tano crying and his old master dead, whom he called several times trying to get him to respond. Becoming withdrawn and grim, Skywalker wouldn't say a word since then, until after the funeral held to honor Kenobi, when he went on a self-imposed mission to locate his murderer, Rako Hardeen, at Trueping's. Though Skywalker would rather kill him, he arrested Hardeen and ferried him to the Republic Detention Center.
After hearing that Hardeen had escaped from jail, Skywalker held a meeting with his friend, Palpatine, when Windu informed the Chancellor that they would remove the bounty on Hardeen and the two other escapees, Eval and Cad Bane; a decision did not sit well with Skywalker. Palpatine suggested that the Council perhaps did not trust him to control his feelings, and Skywalker felt the Council was doing nothing to catch the murderer of his master—his best friend. Exploiting this to his advantage, Palpatine told him not to deny his feelings, for they were what made him special, and deliberately sent Skywalker and Tano to Nal Hutta. There, two Jedi harshly interrogated locals for information, which led them to Orondia, the fugitives last known location.
After spotting their quarry as they prepare to leave, Skywalker rammed their ship into submission and board it in midflight, but was foiled by Bane and a subsequent crash-landing of both parties resulting from the chase. Surrounded by smoke, Hardeen left the ship, and Skywalker confronted him, ready to kill Hardeen when Bane interrupted him. Hardeen intervened then and wrestled with Skywalker, whispering to Skywalker's ear "Anakin, don't follow me." As he felt a connection, Skywalker passed out, only for Tano to protect him for Bane's attempts to execute him. As they returned to Coruscant, Yoda summoned Skywalker to his chambers and revealed the truth to him—that Kenobi was "Rako Hardeen."
Afterwards, Skywalker was briefed along his Padawan about the security plans the Council had for the Chancellor during the Festival of Light on Naboo. Skywalker, Tano, and Windu would escort the Palpatine and Mas Amedda to Theed, where Skywalker was greeted by his wife. At the festival itself, the abduction was initially successful with Cad Bane and Moralo Eval ferrying Palpatine away, while Skywalker and Windu captured Embo and Twazzi; however, Kenobi stopped Eval and Bane, long enough for Windu and Skywalker to arrive and take the two into custody.
As he reunited with his old master, he voiced his resentment for the Council's lack of trust in him as well as Kenobi's decision to hide the truth from him. Wondering how many other lies he had been told by the Council, he set out on his own to bodyguard Palpatine, who continued to place seeds of doubt in Skywalker until they were greeted by Dooku. After destroying two of his MagnaGuards, Skywalker dueled the Count with ferocity, until Kenobi arrived to help him rescue the Chancellor, whereas Dooku fled.
Sometime later, when Skywalker and Tano were on their way to rendezvous with a cruiser, they decided to land at the Stobar spaceport, as Skywalker was hungry and tired of government rations. The two walked into Plop Dribble's, only to find police droids and an unconscious waitress. Though they attempted to investigate the assault, both the police and its owner, Loubo, told not to worry; instead, he offered them a free meal. However, Skywalker sensed a disturbance in the Force, something sinister and familiar—which, unbeknownst to him, heralded the return of the now renegade Sith Lord Maul.
- "I feel responsible for them."
"I know you do, Snips, but remember, purpose must come before feelings."
- ―Ahsoka Tano and Anakin Skywalker
Following a plea made by a rebel cell on Onderon, the Jedi Council considered how to help them fight the Separatists. Skywalker suggested training the rebels in subversive combat tactics; though it verged on terrorism, which the Jedi would not support, the High Council decided to send advisors to the rebel cell for the upcoming battle. On the Nu-class transport Valkyrie 2929, Skywalker, Tano, Rex, and Kenobi reached the planet during the night, when they met Steela Gerrera and were guided to their rebel secret base, where they met her brother, Saw. The team trained the rebels to combat droids, until Separatist probe droids discovered their outpost and attacked, which prompted the cell to enter Iziz.
After some successful operations, Skywalker, Kenobi, and Rex decided to return to Coruscant and report to the Council, while Tano stayed behind as a liaison to the rebels, without revealing herself as a Jedi. They kept in frequent communication with her, to provide guidance, but also to provide help by hiring Hondo Ohnaka to deliver missile launchers to the Onderon rebels for the final assault. Skywalker attended the funeral service for Steela Gerrera.
Skywalker lent the Twilight to Kenobi, who used it to travel to Mandalore to rescue Satine Kryze. With all its technical problems, after landing on Mandalore, Kenobi vowed not to borrow another ship from Skywalker. However, as he escaped, the ship was shot down by Mandalorian commandos and destroyed, moments before Kryze was murdered by Maul during the Mandalorian civil war.
Skywalker was later present when the Jedi Council sent Meebur Gascon and a team of Republic droids to steal an encryption module from the Separatists. Later Skywalker participated in the Republic strategy conference on the space station Valor, while on the station he noticed a ship was going a little too fast. Tarkin told Skywalker that they are scanning Rhydonium on the ship, Skywalker instantly realized it was a bomb, Skywalker was later contacted and informed by Gascon of R2's sacrifice. However, Skywalker refused to believe that his friend was gone. He sent out salvage teams to scour the wreckage, who retrieved R2's remains and repaired him. The two reunited, and Anakin was happy to have him back.
Skywalker was later present when the Jedi High Council met up with the chancellor to discuss Maul's return, during which they decided to leave him alone even though they knew he was still alive.
Sometime later, Skywalker was sparring with Tano when Master Yoda entered to spar with her. He watched on as Tano was defeated by Yoda but managed to progress as Yoda taught her some skills.
Nearing the end
- "I know you believe in me, Anakin, and I'm grateful for that. But this isn't about you. I can't stay here any longer, not now."
"The Jedi Order is your life. You can't just throw it away like this. Ahsoka, you are making a mistake."
"Maybe, but I have to sort this out on my own, without the Council and without you."
"I understand. More than you realize, I understand wanting to walk away from the Order."
- ―Ahsoka Tano and Anakin Skywalker
During the defense of Cato Neimoidia, Skywalker and Tano engaged Separatist forces on their Eta-2 Actis-class interceptors, until they received an urgent mission recalling them to the Jedi Temple. Its hangar had been bombed and, as the two had been off-world during the attack, Skywalker and Tano were to lead the investigation to uncover the criminal—likely to be a Jedi. They went to the crime scene, where they met Russo-ISC, whom Skywalker sent alongside Tano to interview the witnesses, whereas he meditated at the hangar. Unable to discover anything, he met up with Tano, who told him about their missing suspect, Jackar Bowmani, a clue which, in turn, led to his wife, Letta Turmond, who under pressure admitted to feeding Bowmani with nano-droids, but would not reveal her motives.
Skywalker was present at Yoda's eulogy for the six Jedi who died during the explosion, and later took the opportunity to speak with Tarkin. Skywalker and his Padawan were then summoned to the war room to be briefed about a Separatist attack on Saleucami, when Tarkin informed them that Turmond had requested to speak with Tano. When she was framed with Turmond's death and imprisoned, he was forbidden to see her, and only returned to track her down on her escape, following Tano into the pipelines.
Alone, they revealed that their trust in each other was absolute, but as Skywalker pleaded for her to surrender herself and make her case to the Council, she refused to take the blame for something she hadn't done and asked Skywalker to trust her, just as she jumped onto a passing ship, thus escaping to the Coruscant underworld.
As Tarkin declared she was being accused of sedition, Yoda assigned Skywalker and Plo Koon to search for Tano, with some resistance from Windu—who did not believe Skywalker to be emotionally detached to do what had to be done. Nevertheless, when she was captured, Skywalker escorted her to the Temple, where he was later summoned to the Chamber of Judgment along with his Padawan. He was outraged to learn that the Council had already made their decision and that the meeting was simply a formality, and they proceeded to expel her from the Order. Resentful of the Council, he asked his wife, Amidala, to defend Tano at her trial before leaving to capture Ventress himself.
Skywalker soon found and interrogated Ventress, who admitted she was about to turn in Tano to the authorities, until she realized Tano had been abandoned by Skywalker and the Jedi Order, just like she had been forsaken by Dooku. She also said that whoever had attacked Tano had stolen her lightsabers and that Tano had contacted Barriss Offee for help. Promising to kill Ventress if she lied, Skywalker left for the Temple, where he went to Offee's quarters and questioned her, only to engage her in a duel. After subduing her, Skywalker brought Offee to the Republic military base where Tano was being judged. As the Mirialan Padawan confessed, all charges against Tano were lifted.
Back at the Temple, Skywalker and the Council apologized to Tano and invited her back into the Order, with Skywalker offering her severed Padawan braid. However, Tano apologized, leaving him in possession of her braid, and declined the offer. As she left the Temple, Skywalker followed her and asked her to reconsider. Tano, however, declared that she felt she couldn't stay with the Order, due to their lack of trust in her. Despite Skywalker's heartfelt protests and his mentioning that he himself had considered leaving the Order before, she chose to walk away. Tano's departure had a deep impact on Skywalker, leaving him feeling more alone than ever in bearing the expectations of being the prophesied Chosen One. The circumstances surrounding her departure also served to intensify his frustration with the High Council, as he felt they had betrayed her by not backing her innocence.
- "He's in on it! I don't know to what extent. But I know he orchestrated much of this. He told me in the medical bay!"
"He told you? When you tried to assassinate him? You have gone too far, Fives. The Chancellor isn't capable of what you claim."
"He is! I swear to you, General. You've no idea—"
- ―Fives and Anakin Skywalker, before being interrupted by the Coruscant Guard
Skywalker, alongside Jedi Generals Tiplar and Tiplee, were sent to take control of Ringo Vinda's planet-wide station back from Admiral Trench. Only after seven rotations of stalemated combat, did they manage to push Trench's forces to a breaking point. However, one of Skywalker's troopers, Tup, intentionally killed General Tiplar, forcing Skywalker to order his and Tiplee's troops to fall back. He then had Tup checked out to see if he had been brainwashed by the Separatists, only to find nothing in him, even as he repeated nonstop "Good soldiers follow orders" as well as apparent amnesia. Though he did not find anything in him, Skywalker had Tup sent to Kamino for further examination.
After Tup's shuttle was destroyed and he was taken prisoner by Trench, Skywalker investigated the wreckage. Seeing that Tup was not among the dead, Skywalker decided to infiltrate the Separatist lines. Alongside Rex and Fives, Skywalker reached the Separatists' hangar and saw that Commander Kraken had Tup aboard his shuttle. Skywalker and the others the boarded the shuttle and took out Kraken's crew, including Kraken himself, who refused to reveal why they had abducted Tup. Skywalker then had Tup transported to Kamino with Fives and Rex as escorts.
Following the end of Skywalker and the 501st Legion's participation on Ringo Vinda, and the death of Tup, Skywalker and the High Council were informed by Shaak Ti that Fives attempted to kill the Chancellor. Windu, aware that the Jedi were not requested to participate in the manhunt, allowed Skywalker and Rex to secretly search for the clone. They soon were contacted by Kix, who told them that Fives wanted to meet the two at a warehouse in Level 1325. As Anakin and Rex entered the warehouse, they dropped their weapons on Fives' request. After doing so, they were encircled by a ray shield, which prompted Skywalker to question Fives' actions, but he and Rex listened to the fugitive's side of the story. Skywalker refused to believe that the Chancellor was involved in this conspiracy about the inhibitor chips, but their conversation was cut short by the arrival of the Coruscant Guard. Skywalker watched as they gunned Fives down, dying in Rex's arms.
He would report the event to Yoda, Windu, Ti, and the Chancellor, who was swift to lie to the Jedi that all had been the product of a parasite from Ringo Vinda, one that had caused the decay of Fives and Tup's chips; Palpatine urged the Jedi to leave the matter behind, for each day, they grew "closer and closer to victory."
Mission to Batuu
Skywalker was told by Senator Amidala that one of her former handmaidens, Duja, had found something near Batuu that she and Skywalker should investigate. Unfortunately, Skywalker was unable to join her due to being sent to battle. Skywalker allowed her to travel to Batuu by herself. Upon his return to Coruscant after the battle, Skywalker could find records of Amidala's travels in the Outer Rim. After another battle, Skywalker received a message that Amidala's ship was found on Batuu. Skywalker, along with R2-D2, took his interceptor to Batuu. En route to Batuu, Skywalker encountered a freighter. Skywalker spoke with the freighter's captain, Chiss Defense Fleet Commander Mitth'raw'nuruodo, known simply as Thrawn. Unknown to Skywalker, Thrawn was actually a Senior Captain. Skywalker accepted Thrawn's assistance in finding Amidala and Duja.
Skywalker found Amidala's ship near Batuu's Black Spire Outpost. There, he stopped a group of smugglers who were angry about the ship being in their landing spot. Skywalker fought them until Thrawn broke up the fight. Together, they investigated Amidala's ship and learned about Duja's ship, Nomad Four. The two then went to a nearby cantina. After speaking with the bartender, Skywalker and Thrawn came under attack by four assailants. The two of them were able to kill the assailants. Thrawn suspected the assailants were sent to kill Skywalker and that there was the fifth nearby. Skywalker and Thrawn came up with a plan to capture the last assailant. After Skywalker took one of the assailant's body, he pretended to suffer engine damage in his interceptor. After landing, Skywalker came under attack by an assassin droid but was to destroy it. Thrawn was able to capture the assailant and found his freighter, which belonged to the Separatists.
Mission to Mokivj
Skywalker and Thrawn took out the droids guarding the freighter. Together, they found out the freighter was headed to Cermau. As they returned to Black Spire, they came under attack by several thugs. Thrawn was able to use their speeder, to capture the thugs. Skywalker and Thrawn questioned the cargo inspector Oenti, who reveals that the cantina's bartender, Janott had ties to the Separatists' Duke Solha. They learned that they were shipping supplies to a droid factory. After learning of Duja's death, Skywalker told Thrawn about the politics behind the Clone Wars. Skywalker and Thrawn traveled to Mokivj. There, they discovered that the Separatists were mining Cortosis.
Skywalker and Thrawn were captured by Solha's droids and taken to a prison cell. There, they freed themselves and met up with Amidala, disguised as a worker. The three of them ultimately defeated Solha, but Skywalker's attempt at collapsing the Cortosis mine led to the Mokivj catastrophe.
- "Anakin, I understand to a degree what is going on. You've met Satine. You know I once harbored feelings for her. It's not that we're not allowed to have these feelings. It's natural."
"Senator Amidala and I are simply friends."
"And friends you must remain. As a Jedi, it is essential you make the right choice, Anakin, for the Order."
- ―Obi-Wan Kenobi and Anakin Skywalker
Upon his wife's mission to Scipio and subsequent reencounter with Rush Clovis, when she was accused of sabotage and her aide Teckla Minnau was killed, Skywalker was sent to protect Amidala, but was upset to hear that Clovis was involved. Nevertheless, he agreed to help her, and together, they went to Clovis's residence to assist in exposing the Banking Clan's corruption. As they were about to depart along with Clovis, Skywalker defended both Senators from the bounty hunter Embo and his pet anooba, Marrok. The trio were able to escape Embo, thanks to R2-D2, and make their way to Coruscant. Escorted by Yoda, they met with Palpatine and other members of the Jedi Council, and Senator Bail Organa, during which Skywalker's animosity towards Clovis was perceived by Yoda.
As Amidala was appointed by the Chancellor to work closely alongside Clovis to investigate the Banking Clan, Skywalker questioned her decision, as he wanted her away from Clovis, whom he greatly distrusted. Though he demanded that she step away from her assignment, she refused and left with Clovis. Frustrated, Skywalker went to his quarters, where Kenobi (at the behest of Yoda) spoke to him, revealing that he was well aware of Skywalker's feelings for Amidala, and asked his former apprentice not to let himself carried away by them before leaving. Later that night, Skywalker went to his wife's apartment, where he found Clovis about to kiss her, for which Skywalker briefly Force choked him—before giving him a one-sided beatdown despite Amidala's protests, willing to kill Clovis in his jealousy.
Before it was too late, he realized his mistake and stopped, only for Captain Typho to enter. Much to his surprise, Clovis lied about the attack. As they carried Clovis to Amidala's bedroom, Skywalker tried to apologize to his wife, but she told him to stay away from her. Only when they were alone afterward, she questioned their marriage, too steeped in lies and deception, and decided that they take a break from one another after admitting to not feeling safe around Skywalker—who, in turn, admitted to being unable to control himself, even though he did not know why.
Clovis was accepted as the new head of the Banking Clan by the Senate, and Skywalker confided to the Chancellor of his distrust in Clovis, which Palpatine shared. Soon, when Clovis apparently joined the Separatists the day after (which Skywalker found strange), and Scipio was occupied by Separatists, Skywalker was then sent to retake Scipio. After landing, Skywalker went to Clovis's office and tried to reason with Clovis to make him let go of Amidala. At that very moment, though, a vulture droid crashed into the office, making it unstable and causing Amidala and Clovis to fall, but Skywalker grabbed them both, each with one hand. As he could not hold the two, Clovis told Skywalker to let go of him, but he wouldn't; Clovis apologized to Amidala and then let go of Skywalker, falling to his death. Though Skywalker and Amidala reconciled, the Banking Clan came under the control of the Chancellor.
- "The creation of the clone army, kept secret from us Sifo-Dyas did. How this was done we know not, yet now a new piece of the puzzle we have. Perhaps clarity it will bring us, yes."
After Jedi Master Plo Koon intercepted a distress call from a lost shuttle and discovered Sifo-Dyas's lightsaber, its late owner being responsible for the secret creation of the Clone Army. Relaunching the investigation of Sifo-Dyas's death, Skywalker and Kenobi were sent to Felucia, where they spoke to the tribal leaders to find out what happened to the late Jedi Master. Kenobi was told that the Felucians had cremated his body and that another Jedi had been with him when he was killed and reported their findings to Master Yoda.
The two were then sent to Oba Diah when former Chancellor, Finis Valorum told Yoda that Sifo-Dyas had been sent to negotiate with the Pyke Syndicate to stop an underground war. Valorum, however, said that there was no other Jedi sent alongside Syfo-Dyas, but rather his personal aide Silman. On Oba Diah, Kenobi and Skywalker met Lom Pyke, who denied any involvement until Kenobi noticed that he was wearing the crest of Valorum and Skywalker grabbed the necklace and told the Pyke to "stop playing games." Lom finally complied with the Jedi, and told them that they had been paid by a man called Tyranus to shoot Sifo-Dyas's shuttle down. However, as they feared that anyone who paid for the death of a Jedi was dangerous, they kept Silman locked away for ten years as insurance.
Once they met Silman, they realized he had gone mad after being locked up for so long, and were unable to learn much from him before Dooku arrived to kill him before Skywalker and Kenobi's eyes. After engaging Dooku in combat, they learned that the man called Tyranus was, in fact, the Count. After he escaped, they informed the Council of their findings, only for them to question why Dooku had been behind the creation of the clone army, and what the game of the yet-unidentified Dark Lord of the Sith was.
- "Help me to escape. Yes."
"Escape? But you're not in prison."
"No, perhaps, but perhaps I am. Already, all around us, the cage may be. A journey I must make alone."
"The Council will not want you to travel at all, alone even less."
"Disobeying the Council your expertise is. That is why I ask for your help. It is the spontaneity you find so easily which others do not. That is what sets you apart. Now, a walk you will take me on. Come, come."
- ―Yoda and Anakin Skywalker
Upon Yoda's brief contact with Qui-Gon Jinn, Yoda requested that Skywalker meet him on the Temple's training grounds to speak about their experience on Mortis, where both he and Kenobi had spoken to Jinn. As Skywalker, too, was in disbelief of the idea that an individual could retain its identity after death, Yoda left him to rest. Later, when Yoda submitted himself for medical examination by Rig Nema, Skywalker informed them that Chancellor Palpatine wanted to hold an emergency meeting with Yoda, to which Windu responded, leaving the Grand Master free to undergo a deprivation ritual. Skywalker, Mundi, Kenobi, Koon, and Nema watched over the old master until Kenobi interrupted it before it was too late, and Yoda claimed to have spoken with the dead.
With the Council worried for his health, Yoda was placed under the surveillance of guards, so the Jedi Master asked to Skywalker to see him. Yoda asked Skywalker to help him escape, which Skywalker did. Accompanying Yoda to his fighter, Skywalker even lent R2-D2 to Yoda to accompany him on a journey that would take him to Dagobah, a mysterious planet and Moraband, to learn that the Jedi Order would not win the war, and that there was "another Skywalker."
Bombing of the Temple
Prior to a mission that Amidala was taking to Clabron, Skywalker insisted that he be allowed to assist Amidala, under the impression it was a diplomatic mission to Duro. After assurance from Amidala, Skywalker agreed to remain on Coruscant, kissing Amidala. He was startled when he realized Amidala's handmaiden, Moteé, had witnessed their display of affection, though Amidala assured Skywalker that Moteé understood discretion.
Crystal crisis on Utapau
- "How well would you sleep, knowing that I failed you?"
"Not very well, I imagine. Luckily, that isn't true, and never will be."
- ―Anakin Skywalker and Obi-Wan Kenobi
During the last months of the war, Kenobi and Skywalker were sent to Utapau to investigate the mysterious death of Jedi Master Tu-Anh. Once they landed on Pau City, Inspector Jen June led them to see the corpse at the morgue. After examining the body, they went to the place where she had been found, only to determine she had been hit in the optic nerve with a precision laser dart by a sniper. As they found the sniper's position, from the building's owner, Garri, the two Jedi learned of the involvement of MagnaGuards and began to suspect the involvement of General Grievous, and had Inspector June analyze some slimy substance they had found—the secretion of an Amani's skin.
Though Governor Torul Blom asked them to leave Utapau, Kenobi and Skywalker persevered and rented two dactillions to go talk to the leader of an Amani tribe, who revealed that an Amani outcast had entered one of the caves. The two Jedi entered it to find MagnaGuards. Despite some resistance, they managed to have the droids reveal the involvement of the Sugi and went to see Inspector June once again. Soon after, the two attended the funeral for Tu-Anh.
As they reached the Amani settlement they had been looking for, the Amani scattered, leaving Skywalker and Kenobi to follow the tracks of one that appeared to be their leader. During the hunt, Skywalker mentioned Tano for the first time since her departure, and Kenobi asked if he wanted to talk about it, yet Skywalker refused. Kenobi then suggested for them to set up a camp and rest. However, he insisted on the subject, prompting Skywalker to tell Kenobi he missed Tano and to voice his anger at the High Council for turning its back on her. To Skywalker's annoyance, Kenobi stood by the Council's authority, asserting that it had been Tano's decision to leave and that she had allowed her emotions to cloud her judgment, something against the Jedi way. Then, Kenobi suggested he rest, but Skywalker declined so that he could keep the first watch. Finally, he questioned Kenobi on what would happen if he had turned out to be a "major disappointment," but Kenobi wanted to believe it would never happen.
However, they both fell asleep and were captured by a group of Sugis led by Chong, who brought them before Endente as Kenobi told Chong of their "intention" to buy weapons. They learned Endente was, in fact, selling a kyber crystal, and Skywalker prompted him to show it before they made the deal. Brought to the starship where the crystal was being kept, they escaped from their captors, and Skywalker eliminated all the Sugi, except for Endente, who fled. After they discovered the massive kyber crystal inside the ship, the two Jedi managed to transport the crystal through Utapau's plains until they reached Pau City, where Blom had the two Jedi surrounded with his men and Grievous's droids. As the kyber crystal was loaded into a shuttle and sent to a ship on orbit, Kenobi and Skywalker stole a freighter to recover the crystal.
During the persecution, Grievous damaged their ship, forcing them to crash it to disable the hyperdrive and, with their escape pods, board the ship where the crystal was then held. As they got separated, Kenobi was captured by Grievous, and Skywalker recovered his lightsaber, located the crystal and freed Kenobi. Together, they made their way to the kyber crystal at the vault, where they were temporarily trapped until a squad discovered them. Using the crystal and the Force to knock them out, he managed to get to a hangar, where Skywalker stole a shuttle to escape. Meanwhile, Kenobi set several AATs to shoot and overload the crystal, destroying the crystal and the ship, while they escaped from the explosion in the nick of time and returned to Coruscant to report to the Council.
Stationed on Coruscant
- "Should I send a detachment, General?"
"[...] No. It's nothing."
- ―Yularen and Skywalker, as the latter senses Ahsoka Tano
Sometime later, while on a Venator-class Star Destroyer, Skywalker discovered an unknown ship, the Silver Angel, in military airspace. Skywalker then asked Admiral Yularen who was on that transport. After he closed his eyes and sensed Ahsoka Tano's presence through the Force, he decided not to send a detachment to arrest the crew and to let Ahsoka and her companions leave.
Vos and Ventress
- "Ventress isn't capable of anything as selfless as love. And Vos couldn't possibly have cared about a murderess like her. Besides, she's the one who took him to the dark side in the first place."
"Stranger things have happened. And maybe, if she loves him, she's his way back from it."
- ―Skywalker and Amidala discuss Vos and Ventress' relationship
Jedi Master Quinlan Vos had been tasked by the Jedi Council to assassinate Dooku with the help of Asajj Ventress, but during a mission to Raxus Secundus the Jedi turned to the dark side due to Dooku's manipulations and Ventress's training. Ventress staged a rescue mission, which failed and prompted her to contact the Jedi Council. When she arrived at the Jedi Temple, Skywalker and Kenobi escorted her to the Council Chamber, where despite Mace Windu's open disapproval, Yoda dispatched Skywalker and Kenobi to go with Ventress to rescue Vos above Taris. Soon enough, Kenobi, Skywalker, and Ventress were on the cockpit of her ship, the Banshee, to infiltrate the Separatist dreadnought from which Vos, or rather "Admiral Enigma," was issuing orders.
Stealthily, the three boarded the ship and made their way to the bridge, where they found Dooku, instead of Vos. Skywalker then engaged in a duel with the Count, distracting him while Kenobi and Ventress discovered a captive Vos. Though she knew Vos was consumed by his hatred, they escaped to the Banshee, and Skywalker joined with them to escape the enemy ship and return to Coruscant. Back in the Jedi Temple, Skywalker saw as the Council welcomed Vos and pardoned Ventress. That same night, Skywalker reunited with his wife, Amidala, for a moment of respite, during which Skywalker told her of the ordeal—after which, Amidala conferred that perhaps Ventress's love could be Vos's way back from the dark side, leaving Skywalker at a loss for words.
A month later, Skywalker was sent alongside Kenobi, Vos, and Akar-Deshu in a mission to take over a Separatist supply storage base and redistribute the supplies to worlds in need of them. However, their mission went awry when Vos, unbeknownst to them, arranged the base's destruction. After another failed mission to Vos's name, he was suspected of treason, Skywalker and Kenobi were sent to spy on Vos and Ventress as they were deployed to assassinate Dooku during the second battle of Christophsis. When they saw Vos attempt to force the Count to lead him to his master, Darth Sidious, rather than kill him, Skywalker and Kenobi intervened, taking the pair by surprise and arresting them.
However, Vos and Dooku soon escaped from the Vigilance, causing the death of Akar-Deshu and Kav Bayons, and boarded Ventress' ship Banshee to escape Christophsis. Skywalker had the Banshee fired on, forcing the renegades to land on the planet below. He and Kenobi pursued the three injured fugitives to a Separatist-controlled tower, where they surrounded them. There, Skywalker and Kenobi witnessed Ventress' last moments, sacrificing herself to save Vos from Dooku's fatal Force lightning. After her death, Skywalker and Kenobi were joined by the redeemed Vos, and they tried to capture Dooku, to no avail. They then transported Ventress' body and Vos to Coruscant, where the fallen Jedi confessed his crimes and Kenobi defended Ventress.
- "Tell me the sequence to disarm the bomb!"
"Never. Dooku would kill me for losing Anaxes."
"And you think I won't?"
"You're a Jedi. Your nobility--"
"I don't have such weaknesses! Now, let's try that again."
- ―Anakin Skywalker and Trench
Skywalker was dispatched alongside Windu to participate in the Battle of Anaxes to defend the Republic shipyards on Anaxes. With mounting losses on the Republic side, Captain Rex told Skywalker and Windu his theory that the Separatists had learned his own strategy. Considering this possibility, Windu sent Rex and Commander Cody to take a squad, and Clone Force 99, behind enemy lines to infiltrate a Separatist Cyber Center while he and Skywalker held the line. The general staff was told about the possibility of sending a mission to Skako Minor, and Skywalker was sure the Jedi High Council would approve it. Clone Sergeant "Hunter" also stated The Bad Batch would go with them. Although Rex was eager to get going, Skywalker informed him they had a "thing" to do, and, although Rex felt they did not have time, they both went to the barracks. Rex remained outside on watch while Skywalker, holding Rex's helmet, went in and contacted Amidala. Skywalker apologized for being away for so long, but, as the two spoke, Obi-Wan Kenobi approached Rex. The Clone Captain knocked on the door to speed up Skywalker. Skywalker confided that he was worried about his captain, worrying that Rex was letting his personal feelings drive him too much on the mission, although Amidala believed Rex had learned that trait from him. Outside, Rex tried to lie about what Skywalker was doing. However, Skywalker and her ended their conversation, and both went on their way to Skako, although Kenobi revealed he knew he had been talking to Amidala.
As they reached Skako Minor on the Havoc Marauder, Skywalker was captured by the Poletec on their keeradaks, prompting Rex and the Bad Batch to follow them to the village and rescue the Jedi General. They apologized and explained the situation, and the chief helped them reach Purkoll, which they infiltrated with some effort. When they reached the antechamber, Foreman Wat Tambor sent a transmission saying they had violated the Techno Union's neutrality, and sent droid reinforcements. While Skywalker, Hunter, Wrecker, and Crosshair destroyed them, Rex and Tech found Echo—alive, but as a cyborg.
Tech managed to unplug Echo, and they escaped to the ventilation system before being vaporized by Tambor's Decimator, after which Wrecker destroyed the Foreman's main computers with explosives. As they escaped, however, they were surrounded by his D1-series aerial battle droids, but thanks to Tech, they rode keeradaks to the Poletec village. There, they convinced the natives to help them against the Techno Union's forces, including their octuptarra tri-droids, with Skywalker effectively destroying two of them.
Following the skirmish, Skywalker, Rex, and Clone Force 99 returned to Fort Anaxes, where Windu and Kenobi were to take the Separatist assembly complex by air, whereas Echo was to be escorted by the Bad Batch, Skywalker and Rex into Trench's communications vault on a dreadnought on the planet's orbit, where he would plug himself to the dreadnought to feed the Separatist's strategic movements. When Echo did so and deactivated the droids attacking the assembly complex, he realized that Trench had initiated a countdown for an explosion that could destroy most of Anaxes. While Kenobi assisted in the evacuation efforts, and Windu deactivated the bomb, Skywalker went to the dreadnought's bridge to confront Trench, destroying his droid bodyguards. Trench refused to give the final sequence number, believing that Skywalker would not harm him. Skywalker amputated Trench's prosthetic attachments, prompting the Harch to immediately give in. After relaying it to Windu, who deactivated the bomb, Trench then tried to electrocute him; in response, Anakin thrust his lightsaber through the Harch's chest, killing him. He then took the self-destruct detonator for the dreadnought and reunited with the rest of his team.
As they left aboard the Havoc Marauder, Skywalker let Wrecker destroy Trench's flagship, damaging the nearby Separatist fleet, and they went back to Fort Anaxes. Following the victory, Corporal Echo joined "The Bad Batch."
Birth of Darth Vader
Battle of Yerbana
- "Sir, we've received a transmission from someone using your subspace frequency "Fulcrum"."
"Perhaps the siege at Onderon has taken a turn for the worse."
"No, sir. It's not Gerrera. You had best take this transmission here on the ship. Both of you."
- ―Yularen, Skywalker and Kenobi
At some point before the Battle of Coruscant, Skywalker was on Tythe and had another encounter with Dooku, yet he failed to defeat the Count. Towards the end of the war, Skywalker and Kenobi were involved in an incident on Cato Neimoidia. According to Skywalker, he saved Kenobi during this event, although the Jedi Master felt that was not the case.
Shortly after working together on Cato Neimoidia, Skywalker and Kenobi were sent to Yerbana to take down the Separatist forces in the planet. The fight caused Skywalker and Kenobi to split their respective battalions into two fronts. Skywalker and his 501st Legion defeated the Separatist Droid Army, so he went to assist Kenobi and his 212th Attack Battalion, which was suffering heavy casualties from the ongoing conflict. While Kenobi and Commander Cody were taking cover from the blasts, Skywalker stepped in and convinced his Master to follow his plan. Skywalker faked a surrender to draw out the droid commander, who saw through the lies of the Jedi Knight; however, it was too late, as Skywalker used his Force abilities to destroy the droid commander, allowing his 501st Legion led by Captain Rex to make a surprising ambush on the rest of the droid army, ending the conflict.
The 212th Attack Battalion proceeded to help the 501st while Skywalker was approached by Kenobi who complimented him, which Skywalker answered by thanking Kenobi for helping achieve victory. The two were soon contacted by Admiral Wullf Yularen, who informed them of an upcoming transmission going under the code "Fulcrum," while the two Jedi thought it might have been Saw Gerrera, Yularen confirmed otherwise saying it was necessary for the generals to attend the call themselves.
The last meeting of a friendship
- "You capture Maul. I'll take care of Grievous. With any luck, this will all be over soon."
"Master Kenobi always said there's no such thing as luck."
"Good thing I taught you otherwise."
[Skywalker begins to leave]
"Anakin! Good luck."
- ―Anakin Skywalker and Ahsoka Tano's final words to each other as friends
At Yularen's ship, Skywalker and Kenobi were surprised to see Ahsoka Tano and Bo-Katan Kryze were the ones that had made the call. Emotionally shocked to see his former apprentice after several months of being apart, Skywalker barely managed to control himself and proceeded to talk to Tano, who remarked the moment was not a reunion as Maul had been located on Mandalore and they had an opportunity to capture him.
Tano hoped Skywalker and Kenobi would be able to join forces with her to confront him. Tano, Kryze, and her Mandalorians boarded the ship, where they were greeted by Skywalker and Kenobi. The former tried to greet Tano, but his former apprentice turned him down saying they had to act immediately if they wanted to capture Maul. The group went to discuss the possible attack, but Kenobi was not willing to help Tano and her allies unless the Jedi Council gave their permission, causing Skywalker to unnoticeably scowl at him. While Kenobi contacted the Council, Skywalker had Tano accompanying him through the complex. Skywalker led Tano to a room full of the 501st clone troopers, including Rex, who had painted their helmets as a way to honor her former Commander. Skywalker then prepared to give Tano her old lightsabers, but before he could do so, the ship's alarm suddenly went off.
Kenobi rushed in and informed Skywalker and Rex that they would be jumping to hyperspace immediately. When Skywalker asked if this meant the attack on Mandalore was approved, Kenobi revealed that they were actually heading for Coruscant, where a dire situation was happening: General Grievous had launched a full-scale attack on the capital of the Republic, and the Jedi Council had lost contact with Shaak Ti, Chancellor Palpatine's assigned protector. Skywalker was visibly uncomfortable about this news, but Kenobi assured him that their fleet would arrive at Coruscant very soon.
Tano, however, was angered by her former Masters' decision to abandon Mandalore. Kenobi pointed out that they were entering a pivotal moment in the Clone Wars, but Tano countered that Kenobi was playing politics and that the Jedi Order had lost their way by forgetting that their duty was to help people and not politicians, which was why the people (and Tano herself) had lost faith in them. Skywalker heard the argument and weighed in. So as to help Tano in the upcoming siege without compromising Mandalore's neutrality and the mission to rescue the Chancellor, Skywalker promoted Rex to Commander so he could lead the mission and had Tano assisting him as an advisor. When Kenobi agreed, Tano accepted the proposal. Kenobi left the room to prepare their troops leaving Skywalker and Tano behind. Skywalker gave Tano her new lightsabers complimenting them as better than before. Skywalker then headed to rescue the Chancellor as this was now an opportunity to end the war. While he was leaving, Tano stopped him by wishing him good luck in his mission. Happy to have been reunited with his apprentice, Skywalker smiled and they both parted ways. Unbeknownst to either of them, this would be the last time they ever saw each other as friends.
Confrontation on the Invisible Hand
- "Good, Anakin, good! [...] Kill him. Kill him now."
- ―Sheev Palpatine and Anakin Skywalker, on killing Dooku
Having been away from Coruscant for months due to the Outer Rim Sieges, Skywalker and his Master finally returned to the planet after leaving Tano, to lead the rescue of the Chancellor from General Grievous before the cyborg's fleet could flee the besieged Capital. Assisted by a squadron of ARC-170 starfighters led by Clone Commander Odd Ball, the two Jedi fought their way through a swarm of Vulture and tri-fighter droid starfighters protecting the Invisible Hand, General Grievous's flagship. Skywalker and Kenobi headed for the ship while the clones distracted the droids, but Kenobi's ship was damaged and partially disabled by Buzz-droids. Although Kenobi told Skywalker to abandon him and complete the mission, the younger Jedi refused and cleared his former master's ship of droids before escorting him to the Invisible Hand's hangar. After crashing landing, the two Jedi disposed of the few remaining droids in the hangar while R2-D2 located the Chancellor. Once they discovered that he was being held at the top of the ship's observation spire, they concluded that they were walking into a trap when Skywalker sensed the presence of Count Dooku. Not long after they arrived at the top of the spire, the Sith Lord appeared before them and the two Jedi engaged him in a duel.
Dooku managed to gain the upper hand and knocked Kenobi out, but his taunting, intended to erode Skywalker's morale, instead enraged him. Skywalker unleashed his fury on the Sith Lord, brutally overwhelming him and slicing off both of his hands. Taking Dooku's lightsaber, he crossed both his and the Count's blades at the Count's throat, and Palpatine urged him to kill his helpless opponent. Skywalker initially hesitated, but after the Chancellor's continued insistence, he gave into his hatred of his nemesis and beheaded Dooku. He expressed regret afterward, stating it was not the Jedi way, but the Chancellor assured him that he had been right to kill the Count. Despite the Chancellor's pleas, he carried Kenobi on his back to make their escape. However, the elevators leaving the spire had been disabled. With help from R2 and the attack taking place on the Invisible Hand by a neighboring Republic cruiser, they were able to escape in the elevator shaft until the ship's crew was able to regain control of the ship, restoring its gravity and turning the shaft once more into well. Kenobi regained consciousness while they were hanging on inside the shaft and together, he and Skywalker were able to escape the shaft just as a reactivated elevator was about to crush them. However, their good fortune failed them, and they were trapped by a ray shield and apprehended, along with R2, by battle droids.
The two Jedi and the Chancellor were brought before Grievous in the Invisible Hand's control room. The cyborg personally taunted them, derisively commenting on Skywalker's youth considering his reputation. Skywalker retorted with a taunt about the General being shorter than he had expected. Eventually, R2-D2 caused a distraction, allowing Kenobi to draw his lightsaber to him with the Force, freeing himself and then Skywalker. Once the younger Jedi had also summoned his weapon, they engaged and made short work of Grievous's MagnaGuards and the battle droids holding them and the Chancellor. However, as they attempted to apprehend Grievous, he used one the MagnaGuards' electrostaffs to shatter the viewport, depressurizing the bridge and letting the vacuum take him. Skywalker and Kenobi caught onto nearby command consoles until security measures allowed the bridge to repressurize. Before they could reach him, however, Grievous escaped, jettisoning all the escape pods to prevent them from escaping. As the command crew had fled, Skywalker took control of the damaged flagship, which had begun to enter Coruscant's atmosphere. Although he briefly managed to slow the ship's descent, the damage it had sustained proved too great, and the Invisible Hand broke in half, picking up considerable speed as it fell towards the Republic capital. Skywalker eventually succeeded in crash-landing the Invisible Hand on a deserted landing strip, returning the once-captive Chancellor to Coruscant unharmed.
- "Are you all right? You're trembling. What's going on?"
"Something wonderful has happened. Ani, I'm pregnant."
"...That's... That- That's won- That's wonderful."
"What are we going to do?"
"We're not going to worry about anything right now, alright? This is a happy moment. The happiest moment of my life."
- ―Padmé announces her pregnancy to Anakin
Following the ordeal, the two escorted the Chancellor to the Senate building, where they separated—while Kenobi went back to Jedi Temple to report to the Council, Skywalker remained with the Senators who had come to greet the returning Chancellor. He briefly spoke with Senator Organa, who expressed hope that Count Dooku's death could bring a quick end to the war. Skywalker disagreed, saying that as long as General Grievous remained as leader of the Separatist armies, the war would continue. At that moment, he noticed Amidala behind one of the columns, took his leave from the Senator and reunited with his wife for the first time in months. Having been away fighting in the Outer Rim Sieges, Skywalker's single focus was reuniting with Amidala. Amidala then revealed to her husband that she was pregnant. Though they were both worried that this might expose their secret, Amidala especially, Skywalker was overjoyed and told her not to worry, saying that it was the happiest moment of his life. The couple returned to Amidala's apartment, where they began to make plans for when the baby would be born, deciding that their child would be raised on Naboo, in the Lake Country. Amidala also planned to head there before the birth, to prepare the room.
However, that same night, Skywalker's happiness was marred when he suffered a nightmare of his wife dying in childbirth, similar to the visions he had had of his mother before her death. Although Amidala tried to comfort him that it was only a dream, he was terrified that he would lose her, as he had lost his mother. Amidala tried to convince him that they needed help and suggested they ask Kenobi for his assistance. Skywalker refused, insisting that their baby was a blessing, not a curse. The next day, at the Jedi Temple, he sought Yoda's counsel concerning these dreams, but the Grand Master told Skywalker that death was a natural part of life, and to let go of all that he was afraid to lose.
Tensions of loyalty
- "Is it possible to learn this power?"
"Not from a Jedi."
- ―Skywalker and Palpatine discuss the power to stop people from dying
At the same time, tensions were rising between Chancellor Palpatine and the Jedi Council, who were concerned with his increasing power. Matters were made worse when the Senate announced that they planned to grant him more executive powers in order to facilitate the end of the war. When Skywalker was informed of this by Kenobi, he was supportive of the measure, despite the reservations of the Council and Kenobi's warning to be wary of Palpatine. He then told him that the Chancellor had requested his presence for unknown reasons, without informing the Council. So Skywalker met with Palpatine at his office, where he told him that he was appointing the young Jedi to be his personal representative on the Council, a decision that Skywalker believed the Jedi Masters would never accept. When informed of this, the Council allowed Skywalker to sit on the Council, yet they refused to grant him the position of Master, a decision which greatly angered Skywalker. Skywalker turned to his former Master and friend, Kenobi, expecting him to back him up, but he was caught between his friendship with Skywalker and his loyalty to the Council, and so remained silent. Angered more by this, Skywalker reluctantly accepted his position and took his seat on the council. At the end of the meeting, Kenobi acknowledged to Skywalker that his appointment had been accepted so that, on behalf of the Council, he could spy on the Chancellor, which Skywalker was reluctant to do.
At the Galaxies Opera House in the Uscru District, Skywalker joined Palpatine in watching the Mon Calamari Aquatic Ballet performing Squid Lake. During the performance the Chancellor began to stir Skywalker's distrust in the Jedi council, deducing that they had asked Skywalker to spy on him. He claimed that the Jedi were only perceived as good because "good is a point of view," stating that the Jedi and the Sith were not so different. Skywalker rebutted by saying that the Sith were selfish while the Jedi were selfless. The Chancellor recounted the Tragedy of Darth Plagueis to Skywalker, showing that not all Sith were as evil as the Jedi claimed while also tempting the Jedi with knowledge of the power to stop death. Afterward, Skywalker bid farewell to Kenobi, showing gratitude for his teachings and said to each other "May the Force be with you," before parting ways.
Fall to the dark side
- "A powerful Sith you will become. Henceforth, you shall be known as Darth… Vader."
- ―Darth Sidious to his apprentice
In a hologram meeting with Yoda, Cody, Ki-Adi Mundi, and Aayla Secura, Anakin and Mace Windu learned that Obi-Wan had engaged Grievous on Utapau. Anakin was tasked by Windu to inform the Chancellor and see what his reaction is in order to learn his true intentions. Skywalker informed the Chancellor of Kenobi's forces engaging Grievous's, but during the meeting, Palpatine revealed that he knew the dark side of the Force, leading Skywalker to realize that he was the Sith Lord they had been searching for. Palpatine told Anakin that if he turned him over to the Jedi, then he would be unable to aid in saving his wife, Amidala, from her "fated" death that Anakin had been dreaming of.
Despite his confusion, Skywalker still was loyal to the Jedi Order. He told his findings to Mace Windu, who went with Kit Fisto, Saesee Tiin, and Agen Kolar to arrest Palpatine, leaving Skywalker behind. During the ensuing duel, Sidious killed three of the four Jedi with ease but was disarmed by Windu just before Skywalker arrived in his office. Skywalker pleaded with Windu not to kill Sidious, saying that he should be left for the Senate to judge, but Windu felt that Sidious was too dangerous to be left alive, as he essentially controlled the Senate. Ignoring Skywalker's words, Windu prepared to execute the Sith Lord, but Skywalker cut off his right hand, causing Windu to drop his lightsaber and allowing Sidious to send him plummeting out of a shattered window with a blast of Force lightning, all of which was sensed by Tano.
Though horrified by what he had done, Skywalker saw this as the final straw against the Jedi Order, and as such there was no turning back for him. He reluctantly pledged himself to service under his new Sith Master, Darth Sidious, who named him "Darth Vader," a title that he did not bestow lightly. Sidious then declared all Jedi enemies of the Republic and ordered Vader to kill the Jedi at the Temple, while he executed Order 66, during which clone troopers turned on their Jedi Generals and executed them on the spot. Leading the attack, Vader and the 501st Legion carried out this order. During the assault, Vader entered the council chamber and found a group of younglings trying to hide. Thinking Vader was still a Jedi Knight, one boy asked him what they should do, but the new Sith Lord slaughtered the boy and the other younglings. Also during the battle, Vader killed Jedi Masters such as Cin Drallig, before meeting with Sidious, who then sent him to Mustafar.
Following the attack, he went back home to Amidala and told her the Jedi Order had tried to topple the Republic, much to her disbelief, and that he was about to go to the Mustafar system, where the Executive Separatist Council was. Telling her that he would end the war, they kissed and he left aboard his green Eta-2 Actis-class light interceptor, which replaced the interceptor he had lost in the Battle of Coruscant.
On Mustafar, Vader slaughtered the entire Separatist Council, including Wat Tambor, Poggle the Lesser, and Nute Gunray, along with their aides, his eyes now yellow and red with rage. Simultaneously, Sidious carried out the proclamation of the New Order in an emergency session of the Senate, claiming that the Jedi Order had committed treason against the Republic, and reorganized the Republic into the first Galactic Empire with himself as its Emperor. During this time, Vader was followed by Kakan, who believed he was a jedi. Vader showed his face, eyes to Kakan and chased after him to ensure there would be no witness. During his chase, Vader ran into a cloud of Lava fumes. The fumes caused Vader to see hallucinations his fellow jedi such as Windu, Jinn, Koon, Billaba, Yoda, and his former apprentice Tano. Vader was able to push the fumes away from himself and dismissed the hallucinations. Soon, Vader reported his mission's completion to Sidious; on his orders, Vader sent a shutdown signal to the Confederate navy and army, effectively ending the Clone Wars. With his mission completed, and the Separatists dead, Vader looked on from a balcony and shed a tear at the man he had become, but knew it was too late to turn back.
Age of the Empire
Duel on Mustafar
- "You were the Chosen One! It was said that you would destroy the Sith, not join them! Bring balance to the Force, not leave it in darkness!"
- ―Obi-Wan Kenobi, to Darth Vader
Soon thereafter, Vader saw Amidala's star skiff land and ran to meet her. She told Vader that Obi-Wan had discovered their secret and had also told her that Vader had joined the dark side, hoping that he'd prove Obi-Wan wrong. However, Vader only confirmed it to be true. Driven power-hungry by the Dark Side, Vader tried to convince her that they could be happy together in the new Empire, stating that, given time, he could overthrow Sidious and they could rule the galaxy together. Horrified by what her husband had now become, Amidala begged him to stop and leave everything behind "while they still can," but at that moment, Vader saw Obi-Wan walking out of Amidala's ship, due to him secretly stowing away in Amidala's ship. Convinced that this meant that his wife had betrayed him for his old master, and that she brought Kenobi there to kill him, Vader Force-choked Amidala until Kenobi demanded he let her go, by which point she had already fallen unconscious. Although Kenobi tried to reason with his former pupil, Vader refused to listen, as the new Empire was everything he wanted the galaxy to be.
Unable to come to an understanding, and both believing themselves to be in the right, the two former friends then engaged in a fierce duel, which ripped across the Separatist facility, eventually causing it to deactivate and fall into the lava river below. The duel ended on the banks of the river, where Kenobi claimed the high ground and warned Vader not to attack. Blinded by rage and arrogance, Vader leaped to continue the duel, only to have his remaining limbs severed by his former master's blade, leaving only his cybernetic arm. Crippled, Vader slid down to the riverbank while screaming his undying hatred for his former master. Kenobi, taking Skywalker's lightsaber, told him he had considered him his brother and remorsefully left him for dead as a flap of Vader's clothing caught fire and he started burning. Kenobi then left the planet with Amidala, C-3PO, and R2-D2 as Vader lay screaming and burning on the riverbank.
- "Lord Vader, can you hear me?"
"Yes, Master. Where is Padmé? Is she safe? Is she all right?"
"It seems, in your anger you killed her."
"I? I couldn't have. She was alive! I felt it! NOOOOOOOO!!!!!"
- ―Palpatine and Darth Vader, after the latter rises in his armor
Although Vader survived, he was horrifically scarred, both physically and mentally, and had damaged lungs due to the hot ash in the air. Shortly afterward, the Emperor (having sensed his apprentice's peril) arrived on Mustafar, where he found the severely wounded Vader and took him back to Coruscant, in a medical capsule. As the Emperor could not afford to lose Vader, he turned to the Republic's best scientists, among which was Cylo (who in doing so, gained private access to Vader's cybernetics), and by the Emperor's orders, Vader was put into a life-sustaining black suit of armor and outfitted with three new robotic limbs by numerous droids skilled in both cybernetic reconstruction and medical surgery. After two days of nonstop labor, he was finally sealed within his new armor. His eyes showed a brief flicker of fear before his mask and helmet locked together and he drew his first breath. Vader's rebirth was complete. Upon regaining consciousness, Vader asked the Emperor what had become of his wife, and he told Vader that he had killed her in his anger. Unbeknownst to either of the two Sith, Amidala gave birth to the twins Luke and Leia before her death. Overwhelmed by his despair in the belief he had killed Amidala and their unborn child, which fulfilled his prophetic dreams of her death, Vader incidentally destroyed the medical droids and severely damaged the entire room through the Force. He broke free of his bindings on the operating table and struggled to walk under the sheer weight of his new prostheses and armor. He then let out a cry of despair over the love of his life that he believed that he killed.
Vader's despair then turned to rage and he telekinetically slammed the Emperor against a wall in the surgical bay, snarling that his master had promised to save Amidala. The Emperor, as Vader attempted unsuccessfully to strangle him with the Force, responded that in death Amidala had provided Vader a gift: Pain. The Emperor continued by giving Vader a choice; to either accept and use that gift or to die. After a moment, Vader replied that he would live. The Emperor then immediately launched a barrage of Force lightning at his apprentice, and rhetorically demanded that Vader use the power of his lightsaber to defend himself. But Vader replied that his lightsaber had been taken by Kenobi at the conclusion of their duel. As he continued his barrage, the Emperor angrily shouted that the weapon Vader spoke of was not his. Rather, it had belonged to a Jedi, and Vader was now a Sith. Ceasing his Force-based assault, the Emperor drew his own lightsaber. He put the blade to Vader's throat and stated that he understood how traumatic the last few days had been for his apprentice, but warned that should Vader ever use the Force against him again, he would finish what Kenobi could not. The Emperor then deactivated his weapon and stated that, as friends, he hoped that the two of them would never find themselves in a similar situation. He instructed Vader to put aside his rage and lust for revenge against the Jedi for the time being, for the two of them had a great deal of work to accomplish.
Hunting a kyber crystal
Immediately after his surgery, the Emperor took Vader to a balcony overlooking the old Jedi Temple. There, he and Vader watched as Mas Amedda directed a ceremonial burning of the lightsabers of all the Jedi who had been killed in the Temple. As they listened to Amedda's speech, the Emperor asked if his apprentice knew how or why Sith lightsaber blades were red in color. Vader replied that he did not, as the Temple's information on the subject had been "incomplete." The Emperor laughed and contemptuously mused that the Jedi had been uncomfortable with the information and had buried it as a result. He then explained that kyber crystals felt pain just like any living being, and could be made to bleed after a fashion by pouring rage, pain, and hate into them. He asked Vader if he understood, to which Vader replied that he did, stating that he could have given him any of the burning Jedi lightsabers to corrupt, even Yoda's. But he had not, as Vader realized that the crystal of a Sith's lightsaber should be taken directly from a Jedi by that Sith.
As the ceremony progressed, the Clone Troopers attending the vent threw a basket full of various lightsabers into the incinerator, including Yoda's. The lightsabers caught on fire and a moment later, a powerful blast of energy was released into the air as the kyber crystals were destroyed.
Afterward, the Emperor brought Vader to a desert planet in the Mid Rim and assigned him the task of hunting down a Jedi to take a kyber crystal from. The Emperor took his apprentice to a site where he had arranged for a starship to be delivered for Vader's use, but the ship had been stolen by a group of pirates. Leaving Vader to reclaim the vessel, the Emperor departed, and Vader struck out for the planet's nearest settlement on foot. Once there, he eliminated the group of pirates who had stolen the ship and traveled to a Jedi outpost. The station was garrisoned by a group of clone troopers, who noted Vader's approach and hailed him. Though he could have provided the security codes necessary to secure the clone troopers assistance, Vader decided instead to simply kill them. After exterminating the garrison, Vader tasked the droid co-pilot of his ship to search through the station's archives for data on any Jedi who had taken the Barash vow prior to Order 66. Vader's hope was that any Jedi who had taken the vow, one of complete non-interference in all Jedi affairs, would have been not only out of harm's way when Order 66 was issued but would have ignored its occurrence in accordance with the vow. The search identified Jedi Master Kirak Infil'a, a Jedi who had been completely dedicated to combat to the exclusion of all else. When a grenade was thrown at him by two surviving clones, he managed to contain the explosion, which the clones believed would make him unable to do anything else as all his concentration was diverted on freezing the explosion. As they talked of how they would restrain and bring in what they believed was just another Jedi survivor before the Emperor in the hopes of being rewarded, Vader proved their beliefs that he was too preoccupied with the explosive to be false by telekinetically throttling the clones and breaking their necks, before walking far enough away from the explosion to release it.
Vader quickly located the Jedi on the river moon of Al'doleem and sensed as he disembarked his ship that Infil'a was waiting for him. The Jedi Master immediately confronted Vader, and was seized in a Force choke by the Dark Lord. However, Infil'a quickly released a Force blast at Vader which staggered him and disrupted his concentration. Infil'a declared his Barash to be complete and began to ascend the mountain upon which he lived, calling out to Vader to follow if he could. One of the Jedi Master's training droids, Arex, then opened a sluice gate which sent a river of water crashing down upon Vader. The Sith Lord was visibly battered by the rush of water, but managed to telekinetically part the river and walked to the shore. He was then set upon by a group of gigantic carnivorous birds, which damaged one of his cybernetic legs. Vader eventually crushed them all with the Force and made his way to the peak of the mountain. There he found Infil'a and Arex awaiting him. Vader quickly unleashed a Force push that blasted Infil'a off his feet and dazed him long enough for Vader, who was unarmed, to destroy Arex and take the droid's training lightsaber. He threw the droid off the mountain and engaged Infil'a, who sensed that Vader not only wanted to kill him but wished to take his lightsaber as well. However, Vader's previously damaged leg broke apart at the knee a short time into the duel, rendering him unable to continue the fight. Infil'a then declared his intention to seek out Sidious and kill him, and blasted Vader off the top of the mountain with the Force.
Regaining consciousness, Vader used the Force to reassemble his cybernetic limbs with the dismembered pieces of Arex, who coincidentally had landed near where Vader had fallen. He then tracked Infil'a to Am'balaar City, where he reengaged the astonished Jedi Master. Fighting atop the Am'balaar city dam, the two crossed blades until the duel was interrupted by a trio of security guards. Annoyed, Vader telekinetically flung the guards from the top of the dam, but Infil'a caught them and used the Force to lower them to safety. Infil'a then shouted at Vader not to involve anyone else in their duel, but Vader instead took advantage of Infil'a's concern for innocents by ripping apart a building-sized water storage tank situated in the city below. As Infil'a attempted without success to use his own powers to stop the destruction, Vader telekinetically removed the Jedi's lightsaber from his belt and claimed it for his own. He then grabbed Infil'a in a Force choke and lifted him from the dam. Infil'a pleaded with Vader to spare the civilians below the dam, but Vader ignored him. As the enormous tank burst completely, flooding Am'balaar City, Vader crushed Infil'a's throat with the Force and tossed his body into the wreckage below.
After obtaining a Jedi lightsaber and the kyber crystal within, Vader reboarded his ship, whereupon the droid co-pilot seized control of the vessel and jumped to hyperspace. The droid then began to play a pre-recorded message from the Emperor to Vader. The message stated that, per the Emperor's instructions, the droid had plotted a course to the planet Mustafar, where Vader would find a dark-side locus which he could use to help him corrupt the kyber crystal. As the message concluded, Vader touched down on Mustafar and quickly found the locus the Emperor had spoken of, an ancient Sith shrine within a shallow cavern. There, he disassembled Infil'a's lightsaber on a small, flat rock formation and removed the kyber crystal. However, when he attempted to corrupt it, the crystal resisted and used the Force to send Vader careening into one of the cavern walls. The crystal then caused Vader to experience a vision wherein he rejected the dark side, journeyed to Coruscant, and killed Palpatine. In the vision, Vader then found Obi-Wan and begged for his forgiveness. As he knelt in contrition in front of his former master, Obi-Wan called out to Vader by his former name, Anakin. Upon hearing this, Vader snapped out of his vision and angrily rejected the possibility shown to him by the crystal, declaring "this is all there is." He then began to pour his hatred, pain, and rage into the crystal. As the planet around the cave was consumed in a violent storm, Vader succeeded in corrupting the crystal.
Afterwards, Vader returned to Coruscant and stormed into the Emperor's office during the middle of a discussion between Tarkin, Mas Amedda, and the Emperor regarding the construction of the Death Star. As Vader was completely unknown to anyone other than Palpatine at the time, the Royal Guards in the Emperor's office attempted to intercept him, only to be blasted back into the office's large window. Seeing Vader, the Emperor dismissed both Tarkin and Amedda, the former of whom expressed concern for his safety. Reassuring Tarkin, the Emperor repeated his command, and the two Imperial officials departed, leaving Vader to triumphantly display Kirak Infil'a's lightsaber, now emitting a crimson blade, to the Emperor.
Training the Inquisitorius
- "The Inquisitors are formidable fighters. They are former Jedi!"
"And they fight like it. Defensive. Moving to attack only when there is no other choice. The Jedi taught that a battle could be counted a victory even if both parties survive. This error has infected the Inquisitors' tactics."
- ―The Grand Inquisitor and Darth Vader
Shortly after returning to his master, Vader retired to a medical chamber to repair his damaged cybernetic components as the Emperor congratulated him for taking his first step to mastery of the dark side. Leaving Vader to repair his armor and limbs, the Emperor informed Vader that he had a new mission for him to undertake once his convalescence was complete. A short time later, Vader was informed of an intruder in the Jedi Temple Archives. He promptly confronted the intruder, who wielded a red lightsaber. As the two fought each other, the intruder appeared to take the advantage, but after a time Vader revealed that he had simply been testing the modifications that he had recently made to his armor, and promptly destroyed the intruder's lightsaber. As Vader went in for the kill, the Emperor arrived and told him that the intruder, titled the Grand Inquisitor, was part of the Inquisitorius. Vader was then taken to The Works, where Vader saw the rest of the Inquisitorius training themselves. Vader was told that most of the Inquisitorius were Jedi who converted to the dark side in the wake of the Order's destruction in order to save themselves. Vader and the Inquisitorius were then given the mission to finish the remaining surviving Jedi of the Emperor's Purge.
Vader dueled the Sixth Brother in a training session and cut off his arm in order to teach him about loss. Vader then spoke with the Grand Inquisitor about improving the Inquisitorius' training methods. They began to search for other Jedi that survived the purge. Vader saw the Inquisitors' target list and noticed the Jedi Archive's Chief Librarian, Jocasta Nu, on it. He asked the Emperor what was so important about her. The Emperor explained that she had knowledge of the Sith that she and the Jedi council had kept secret. The Emperor told Vader to find Nu and bring her to him. Vader assigned the Grand Inquisitor to search the Archive for information on her.
Hunt for Jocasta Nu
At that time, Nu had returned to Coruscant and sneaked into the former Jedi temple to search for a list of young Force-sensitives in her secret archives. As she roamed the ruins, her droid, Beetoo, informed her that her ship was about to be discovered. She informed the droid that she would adjust her plans accordingly. As Coruscant Security Forces came into the hanger, Beetoo detonated Nu's ship and killed the three security officers. As Nu made for a secret archive vault, she noticed the Grand Inquisitor reading through the Jedi knowledge. She continued, only focusing on the mission at hand.
Vader was contacted by an Imperial Security Bureau major, who had discovered a Jedi insignia on the wreckage of Nu's ship, and he went to the Imperial Security Bureau headquarters to check it out. When Vader arrived, the major asked what rank he should address him by, and Vader said, "lord." The major explained to Vader their suspicions that the explosion was premature and the Jedi insignia was merely "rabble-rousing graffiti" used as a calling card. Vader told him he was wrong, and as the major explained his experience in intelligence, Vader used the Force to reconstruct Nu's ship, showing the major that he was indeed wrong about the cause of the explosion. Vader then ordered him to search every level of Coruscant, steering clear of the Jedi temple.
Meanwhile, Nu was about to vacate the temple when she noticed the Grand Inquisitor insulting the Jedi knowledge he was examining. His comments eventually drove her over the edge and she confronted him with her lightsaber. Vader arrived at the temple entrance and Commander Fox already had sealed the place. When Fox asked him what they were expecting to happen and Vader told him that they had missed a Jedi during Order 66. As Vader entered the temple, Nu was pinning down the Grand Inquisitor with her lightsaber and threatening him. The Grand Inquisitor asked how she did not remember who he was, stating the times she had denied him the Jedi knowledge he sought. Nu attacked him, kicking off a short duel where the Grand Inquisitor quickly outwitted her. The Grand Inquisitor would have killed Nu if not for Vader's arrival. As Vader stopped the Grand Inquisitor from slaying the Jedi, Nu used the Force to rain Jedi books on them, and she fled the scene.
Vader made chase and as he followed Nu's trail, she made it to the archive vault and used a terminal to purge the entire library of its knowledge. As Vader entered the vault, he was confronted by the droid guard, Cator. He identified Vader as Anakin Skywalker and told him he was not authorized to be there. Vader threw his lightsaber at the droid, but being a guard against possible Force-sensitive threats meant the droid was ready for that move, and it caught Vader's weapon. Vader then punched Cator's arm off, and the droid caught his wrist and squeezed it with its robotic hand. Vader drove his fist through Cator's face before the droid could damage him any more. But as Cator dropped to the floor, Vader noticed a powerful shot being fired at him and used his lightsaber to deflect it. The shot, fired by Nu using a lightsaber rifle, knocked Vader back as it ripped through a bookcase. Nu stood at the entrance of the vault, confronting Vader.
As Vader got up again, he tried to convince Nu to drop her weapon. Nu ignored him and fired again. Vader dodged her shot and she fired a third time, further devastating the vault. As she continued firing, she tried to convince Vader that he was just a tool to the Emperor, saying that he could never get rid of the light side of the Force as it always found its vessels. Nu's rifle then failed to keep firing, and Vader deactivated his lightsaber, telling her she would not be harmed. Nu's rifle then began beeping and she threw it towards Vader. He used the Force to push it away, and it exploded, throwing both of them to the floor and breaching the side of the temple.
Nu fled through the fresh hole in the wall to find newly alerted clone troopers around the perimeter. They fired at her and she jumped down, deflecting their shots back at them. As the clones put more pressure on her, she Force-pushed them over the ledge behind them. Vader then appeared through the wall and the clones assumed he was too a Jedi and fired on him. At that moment, Commander Fox approach the scene on an Imperial Patrol Ship and realized that they were firing on Vader. He then had his ship fly over to Vader and ordered his units to a ceasefire. Vader jumped onto the ship and when Fox tried to explain the misunderstanding, he used the Force to break his neck. The clones on the ground continued firing on Nu and managed to disarm her. She then found herself cornered by Vader and the clones, and she attempted to jump off, only for Vader to use the Force to catch her. He brought her to his ship, and there she told the clones that he was the Jedi Knight Anakin Skywalker. Vader used the Force to throw the clones off the ship and when Nu asked of what became of her, he killed her. Vader then crashed the ship and contacted Sidious, telling him that Nu died in an attempt to escape. Vader then crushed the list of Force-sensitive children that she had with her.
Defiance from the Imperial hierarchy
Believing that he lost all that he cared about by his own hand, Darth Vader embraced his role as the Emperor's chief enforcer. Few knew who he was, and even fewer suspected that he had once been Anakin Skywalker. His appearance at the Imperial court and the favor he carried from the Emperor earned him the distrust of Imperial officers. They resented him for appearing out of nowhere and having authority over them because of his link to his Master. They also resented his heavy-handed treatment of them, such as when he used the Force in the presence of his Master to choke Colonel Barokki.
The situation eventually came to a head when Vader investigated a Jedi sighting on Cabarria. Accompanied by the Ninth Sister, he headed to the bar where the identification had happened. Although the Ninth Sister had originally been planning to investigate alone, Vader had come, claiming she was not yet ready to face a Jedi in combat but secretly because he wanted to fight another Jedi. The Ninth Sister commented on his true desire, using her empathic abilities to read him clearly. As a result, Vader ordered her to remain outside while he investigated. Once inside, the Dark Lord was attacked by a family of bounty hunters named Bhada, Ramat and Chanath Cha. Using ion grenades, they neutralized all the weapons in the bar while Chanath tried to seize Vader's lightsaber with a tractor rifle. However, he used the Force to seize the lightsaber midair and, under the strain of the two opposing forces, the hilt shattered, leaving only the red kyber crystal.
The Chas told the assembled customers that they had come only for the "Jedi" and that they weren't planning on harming anyone. However, a disarmed Vader disagreed and used the Force to turn the customers into projectiles aimed at the Chas. Taken by the surprise, the bounty hunters turned on their shields to protect themselves. As they attacked him, Vader also used the customers and the bar's furniture as shields. Eventually, the hunters realized they could not defeat him and made to flee. Reclaiming his crystal with the Force, Vader pursued them.
Emerging from the bar, Vader initially suspected that the Inquisitors had been behind the attempt on his life and threatened the Ninth Sister with her own lightsaber. The Inquisitor's denials did not sway the Dark Lord, but neither did they prove her guilt. Determined to find who had placed a bounty on his head, he pursued the Chas. They eluded him for a time until he crashed a massive vehicle into their path, causing their speeder to crash. Seizing Chanath in a Force choke, he requested they tell him who had ordered his death. They told him about an anonymous bounty with an exorbitant price posted on the hunter net. Ramat Cha, a talented slicer, offered to uncover their employer for him in exchange for their daughter's life. When they demanded that he release Chanath first, Vader refused and threatened to kill them all. However, the Chas countered that, even in death, they would be together so he could not threaten them with such tactics. Grudgingly impressed, the Dark Lord demanded proof that Ramat could deliver her side of the deal, which she proved by tracking the signal of the bounty back to Coruscant. Vader released Chanath as agreed, at which point the bounty hunters made their daughter swear that she would seek no vengeance against the Dark Lord, a deal Vader chose to honor. To complete the deal, Ramat provided Vader with the information he had requested and gave him the source of the bounty on him: the Imperial Executive Building on Coruscant, specifically the Emperor's office.
With their business on Cabarria completed, Vader and the Ninth Sister left the planet and returned to Coruscant. Now suspecting that the Emperor had placed the bounty on his head, the Dark Lord planned to confront his Master about his intentions. As the Ninth Sister piloted the ship through hyperspace, Vader worked on creating a new lightsaber. His droid meanwhile investigated the origins of the kill contract placed on him and confirmed that the order could have come from the Emperor's office, with no evidence of slicing to indicate foul play. But, as the ship arrived in orbit over Coruscant, the ship's attempt to transmit clearance codes for landing was jammed and the ship itself was marked as being part of a Separatist splinter cell. The Imperial capital's orbital defenses targeted Vader's ship. Only the Dark Lord's skill as a pilot prevented them from being destroyed, although the ship was damaged and forced to crash land on Coruscant. Tired of the repeated attempts on his life, the Dark Lord headed to the former Jedi Temple to confront the Emperor.
The Emperor was investigating the hoard of artifacts that Jocasta Nu had collected and stored in the Jedi Archives when Vader arrived. The Emperor sensed that his apprentice did not wish to discuss his recent discovery, although he did praise him for having found the Librarian's stash. Vader informed his master of the events on Cabarria and his investigation into the kill order against him, before directly asking his Master whether he had placed it on his head as part of a test. Noticing Vader's new lightsaber, the Emperor asked to see it, approving of its design. He also chastised his apprentice for believing that he would resort to such methods as placing a bounty on his head if he wanted to have him killed and that he did not "test": he "taught." He also told Vader that finding the assassins was his task, not theirs. This echoed a previous lesson he had taught Vader when he had "disciplined" Colonel Barokki: that they must not kill everyone in the galaxy, but that having power meant they could, and that they would never lack for people to destroy.
Vader returned to his quarters, where he meditated on the past events and his Master's words. Thinking back to all that had happened, he eventually realized the cause of the conspiracy against him was that his sudden elevation had caused concern and fear among the ranks of the Imperial officers, who knew that he had "strength," but not that he shared the Emperor's "power." Despite a lack of proof, Vader became convinced that Colonel Barokki, who had so suddenly borne his displeasure, must be involved in the conspiracy. The Dark Lord met with the Emperor and shared his conclusions, and requested that he be publicly recognized and allowed to show them the consequences of opposing him. The Emperor asked whether he was sure, and Vader confirmed it: he would not kill them all unless he had to but would not allow them to act against him with impunity. The Emperor agreed to Vader's plan, but forbade him from killing Tarkin, as he was essential to his plans.
The Emperor gathered the elite officers of the growing Imperial military to clarify the new hierarchy. He formally introduced Vader as his emissary, who spoke with his voice and whose commands would need to be obeyed as if they had come from the Emperor himself. The Emperor then moved aside and allowed Vader to speak: the Dark Lord summoned five officers before him: Corin Ferro, Zorta Bingan, Joon Strephi, Tomas Azoras, and Barokki. Informing them that the two attempts on his life had been made from within the Officer Corps and that he had his suspicions who had been responsible, he instituted a new rule: for every assassination attempt he survived (and he warned them that he would always survive), five officers chosen at random would be executed. He instantly executed the five designated officers with a Force choke before departing, leaving the remaining officers stunned and afraid.
Mission to Mon Cala
One year into the reign of the Empire, Vader was reliving his duel on Mustafar through meditation. During his experience, he was already in his cybernetic suit, and he used the Force to throw lava at Obi-Wan. Obi-Wan jumped up to dodge it, but Vader Force-choked him and threw him into the rocks. Vader watched Obi-Wan burn before he awoke in his meditation chamber as the Emperor asked for him over the comm. In his throne room, the Emperor told Vader that a year after his ascension, it was time to show that his voice was the only voice within the Empire. Vader asked how, and the Emperor told him that Mon Cala would make a great example of the price of defiance. He further told Vader that King Lee-Char may have had an adviser helping him with his negotiations with the Empire. Vader asked if it could be a Jedi, and the Emperor said it was possible. He told Vader to take a team to investigate this and claimed the military aspects of the operation would be left to Moff Tarkin.
Vader arrived at Mon Cala aboard the Zeta-class shuttle Infernum. With him, he took three Inquisitors, the Sixth Brother, Ninth Sister and Tenth Brother, and a death squad of Purge Troopers. At this time, the Imperial ambassador Telvar had just finished another meeting with Lee-Char, and the man was walking to his shuttle when he saw Vader descend from the ramp of his shuttle. The Ninth Sister struggled to get past the king's Chief of Security, Gial Ackbar, and Vader confronted the Mon Calamari, asking if he had read the writ that the Ninth Sister had given him. Ackbar confirmed that he had, but demanded that he knew their business as he had a job to do and so did Vader. Vader complied and explained about a possible enemy of the Empire on Mon Cala. As he said that, Telvar's shuttle took off and flew for Tarkin's Star Destroyer, the Sovereign—which was in orbit above Mon Cala. However, as Ackbar denied the possibility of an enemy of the Empire being on Mon Cala, Telvar's shuttle exploded.
Telvar's assassination prompted Tarkin to enact a full-scale invasion of Mon Cala. His forces landed at Dac City, where Vader had arrived, and laid siege to the Mon Calamari and Quarren defenses. Vader and his team sprang to life and soon seized the landing pad where the Infernum was parked. He then led them to the Dac City palace to find Lee-Char and ask him about the possible Jedi. They fought their way through the palace guards and entered the palace, where the Ninth Sister began torturing Lee-Char for the location of the Jedi. However, another threat loomed over them. A massive tidal wave had suddenly erupted as a part of Lee-Char's defensive plan. The Sixth Brother warned them of this, and he and the Tenth Brother began shielding Vader and the Ninth Sister from the wave using the Force. When their attempts began failing, Vader joined them, but it wasn't enough. The group was washed away by the wave, and Dac City was left in ruins.
Vader awoke at the bottom of the Great Ungeness Trench. As his oxygen supply was dwindling, he used the Force to create an air bubble for himself. Suddenly, he was attacked by a squid-like creature, and after wrestling with it, he killed it with the Force. Vader then rode its body using the Force and eventually picked up a transmission from the Inquisitors. Vader asked them to come to his position, and they did so in an Imperial submarine. When they picked him up, he asked about the Jedi, and the Inquisitors said that he was still alive somewhere. Vader then asked about Lee-Char, and the Ninth Sister said that they didn't know, but she then revealed that she had gotten the Jedi's location from him. Knowing exactly where their target was, they began traveling for the Jedi.
Vader and his team arrived at the Jedi's location to find the individual and his disciples evacuating. The Jedi, an Iktotchi Padawan called Ferren Barr, had been notified by Lee-Char after he was recovered following the events at Dac City. The group of them immediately scattered, but one of the disciples instead attacked the submarine head-on with his blaster. The shots bounced off the window, and Vader used the Force to crush his helmet. The other fled in the direction of Bel City, and as Vader caught up with them, another disciple turned around to attack them. He too died in the process but managed to slow Vader's submarine, and the rest of the group followed Barr to Bel City. Vader and the Inquisitors arrived at Bel City and marched down the hallway, reinforced by the Inquisitors and the Purge troopers. Vader was then contacted by Tarkin, who was struggling to deal with the grueling conflict on Mon Cala. Vader told Tarkin that he was busy, but Tarkin knew that and asked him to do something else instead: capture Lee-Char. Vader told Tarkin that he did not answer to him, but Tarkin replied that capturing Lee-Char was the only way to end the fighting quickly on Mon Cala, and he pledged to owe Vader a favor if he did so. Vader agreed and told the Inquisitors to continue the hunt as he left.
Vader arrived at Lee-Char's Royal Command Bunker and killed his guards. He then disarmed Lee-Char and contacted Tarkin, who told him to take Lee-Char to a window and send him his exact location. Vader asked Tarkin if he was going to send a shuttle, and the man said not yet. Once Vader did what he asked, Tarkin began a bombardment of Mon Cala. Lee-Char watched in horror but refused to surrender. The two were interrupted by Barr, who had outsmarted and scattered Vader's team. Barr confronted Vader and the two dueled. As they fought, Barr revealed that he had assassinated Telvar to send the Mon Calamari into war. Lee-Char overheard this and realized his mistake in following Barr. He ran to his terminal and sent a message to the Mon Calamari and Quarren forces, ordering them to cease fire. Lee-Char then contacted Tarkin, notifying him of the surrender. Tarkin sent a shuttle to pick him up but continued the bombardment.
Vader and Barr continued fighting, and Barr began laughing. Lee-Char questioned this, and Barr said that he had completed his plan. Barr prophesied that the Mon Calamari vessels would be at the forefront of a great rebellion decades from then, and decades after that. Vader told Barr that he wasn't a Jedi anymore, and Barr told him that that made two of them, saying that he still beat the Sith. Vader then slew him, and the shuttle arrived to pick up Lee-Char. The king told Vader that Mon Cala would rise again, but Vader told him that there was no Mon Cala, only the Empire. Some time after the mission, Vader ordered to imprison and tortue the people of Mon Cala.
The Emperor's emissary
Over the next two decades of the Empire's reign, Vader would remain one of the few who enjoyed direct access to Palpatine and his preferred envoy for all matters that the Emperor took a direct interest in. Such matters included the elimination of rebel uprisings and the continued construction of the Death Star. One of Vader's earliest missions on the Emperor's behalf was to effect an execution on Murkhana. He was also made privy to the secret construction of the Death Star, to be overseen by Wilhuff Tarkin. The Imperial officers remained wary of Vader and his power, as well as his continued devotion to the ancient ways of the Force, but none rose to challenge him without feeling the consequences.
Despite the mistrust and even hatred he generated among the officers, Vader was held in high esteem by the Stormtrooper Corps, as he often fought alongside them at the front line rather than remaining in command centers. As the Emperor's enforcer, Vader retained command of the unit he had commanded during the Clone Wars as Anakin Skywalker: the 501st Legion. When the Emperor retired the clone troopers, the rank and file of the 501st were composed of recruited stormtroopers, some of whom received training from the Dark Lord himself, such as Sergeant Kreel, an undercover agent whom Vader trained in lightsaber combat. Through their missions on Vader's behalf, the 501st came to be known as "Vader's Fist." On one occasion, the stormtrooper Terex met Vader, becoming terrified of him while also respecting him. Vader also garnered strong support from the pilots of the new Imperial Navy.
Investigation on Geonosis
Vader soon became aware of a project that was taking up many resources. He began investigating, which led him to the data vault on Scarif. There, he found Project Stardust, a project that was a large battle station the size of a small moon. Vader studied its design before he was interrupted by Tarkin, who was very displeased with Vader's snooping. Tarkin told him he wasn't authorized to be there, and Vader claimed that the Force was all the authorization he needed. Vader denied that he was Tarkin's beast but the man denied his claim and taunted Vader, saying he didn't need the Force to know he was very angry. Tarkin then produced a hologram of the Emperor, who told Vader he did not recall sending him to Scarif. Vader apologized and told the Emperor he only sought to study the ways in which the Empire would extend its rule over the galaxy. The Emperor told Vader of a new mission he was to go on. There had been certain instances of sabotage during the Death Star's construction that Vader needed to discover the source of before it got worse. The Emperor further told Vader that Tarkin had full authority over him and that if he disappointed him, he disappointed Palpatine.
Vader arrived at Geonosis and met with Commander Orson Callan Krennic. As they greeted, an overhead rock formation exploded and rained down on them. Vader saved himself and Krennic and they went to his office to discuss the matter. Krennic claimed it was Tarkin sabotaging his efforts in order to get rid of him and take over the project. Vader asked him if there was any proof and Krennic wasn't able to produce anything. Krennic then explained to him the incidences that had occurred in the last three months. Vader gave his knowledge on the situation to loyalty officer Sid Uddra, who met him at the Petranaki Arena to discuss what she suspected. She told Vader that as much as Tarkin and Krennic's rivalry arose tension between them, it was unlikely for either to be the culprit. She then offered Vader with another individual to look into: the scientist Galen Walton Erso. Vader looked through his office and found many kyber crystals in which he bled for himself without issue. He then found a recording of Erso and his family. Vader also noticed that Erso called his daughter stardust, which was the codename for the Death Star's project. Finally, Vader found an ootheca egg in a box. Knowing that Geonosians were a slave race and were forbidden from breeding freely, he confronted Krennic about this. Krennic denied that it was him and suggested that some of the slaves may have sent it as a distress call to Erso. Vader then deduced for himself the saboteurs at hand.
Vader and a squad of death troopers entered a Geonosian hive and found the queen and her minions. The two sides engaged but Vader quickly came out on top, slaying the queen. After the battle, he returned to Tarkin on the Carrion Spike and reported his findings to him. Tarkin asked Vader how he knew the queen's hive had orchestrated the sabotages and Vader told how their slicers had confirmed the hive to have installed corrupted tech into production, ensuring accidents. Tarkin then asked Vader how he may have dealt with them and Vader said that they were animals and so they were slaughtered like animals. Tarkin finally asked Vader if there was anything else and he stated to Tarkin that his project, the Death Star, was able to destroy a planet. Tarkin asked how he knew and he told him of the kyber crystals he saw in Erso's office. Tarkin then asked Vader why he wasn't happy for this revelation, and Vader said that he distrusted his reliance on technological aberration. Tarkin then told Vader that he was one of those before realizing that Vader wanted to be the only technological aberration. Vader warned Tarkin that the Death Star may become his tomb, and when Tarkin asked if that was a threat, Vader told him it was only a prediction.
Relics of the Clone Wars
Years after the skirmish aboard the Tribunal during Order 66, but still during the early Imperial era, Vader traveled to the snowy moon that was home to the crash site of the Venator-class Star Destroyer. Investigating the wreckage with a contingent of snowtroopers, Vader discovered a memorial to the clone company that perished in the crash, as well as a lightsaber, partly frozen but still functional, that once belonged to his former apprentice, Ahsoka Tano. Igniting the lightsaber's blue blade, Vader heard a squawking sound and turned his head to the sky, where he saw a strange bird soaring through the air. After gazing at the bird for a moment, Vader deactivated the lightsaber and turned away from the crash site with the saber in hand, believing his Padawan to be dead and gone.
Rebellion on Ryloth
- "Are you testing me, Master?"
"Testing you? Is that how you perceive things?"
"Am I wrong?"
"We are, all of us, always being tested, my friend. Tests make us stronger, and strength is power, and power is the point. We must pass all the tests we face. Or die in the effort."
- ―Darth Vader and Darth Sidious
Five years into the Age of the Empire, Vader, while meditating aboard the Perilous, was informed by Captain Luitt of an attack on the Yaga Minor shipyards. The attack had been staged by several dozen members of the Free Ryloth Movement, a primarily Twi'lek insurgency intent on liberating their homeworld from the rule of the Empire. The insurgents hijacked an Imperial weapons transport, and Vader led a squadron of V-wing starfighters in pursuit. After a long chase, during which the transport fled through hyperspace to several different systems, its engines overloaded when it attempted to make yet another jump and Vader's squadron was finally able to engage it. The squadron brought down the transport's shields with minimal casualties while Vader crippled the engines.
Though the squadron commander suggested allowing the Perilous to tractor the transport into one of its hangar bays when it arrived, Vader assumed (correctly) that the insurgents planned to destroy the transport by detonating the heavy ordnance present in the ship's cargo bays. In order to prevent this eventuality, Vader crashed his black Eta-2 Actis-class light interceptor into one of its gun bubbles and ejected just before the collision. He then entered the ship through the damaged gun emplacement and proceeded to kill all of the insurgent Twi'leks on the ship. After eliminating the insurgent leader Pok, Vader noticed an active comlink on the bridge. Assuming that another rebel ship was nearby, Vader had his V-wings fan out in a search pattern, but the rebel ship escaped detection by shutting down nearly all of its systems and hiding in the rings of a nearby planet. Finding nothing, Vader had the Perilous collect the transport, and returned to Coruscant.
In the Imperial Palace, Vader reunited with his master. There, he and Sidious met with Ryloth's Senator Orn Free Taa involving the inconvenience that was the Free Ryloth Movement. The movement, though relatively minor, had been conducting raids on Imperial shipping facilities and transports and had seriously impacted the flow of Spice from the planet. As such, Sidious believed that the situation warranted his personal attention, and decided that he, Taa, and Vader would travel to Ryloth for a state visit. After informing the Senator of the planned journey and dismissing him, Sidious informed his apprentice that Taa almost certainly had a traitor in the midst of his support staff who was feeding the movement classified information on Imperial doings.
Though Vader understood his master's purpose in acting as bait alongside himself and Taa, he saw no reason why the Emperor should potentially risk his own safety over such a minor issue. Rather, Vader advocated for simply killing Taa and his entire staff, thereby guaranteeing the elimination of the traitor. However, Sidious wished to eliminate the roots of the treachery, and not simply the lone traitor in Taa's staff. To that end, Sidious gave the order for Moff Delian Mors to be informed that Taa would be arriving for a state visit, but stipulated that she should not be told that either he or Vader would be accompanying the Senator. In this way, Sidious hoped to provide further encouragement for the movement to attack, as he assumed that they would discover his and Vader's plans via their spies. Ten days later Vader, the Emperor, Taa, and a contingent of Royal Guards journeyed to the Ryloth system aboard the Perilous.
Assassination attempt on the Defiance
While traveling from Coruscant to Ryloth, the Emperor ordered the Perilous to stop in the Denon system to consult with several navy chiefs on how to better integrate disparate naval academies into one Imperial Naval Academy. The Emperor ordered Vader to oversee a training session conducted by Commandant Pell Baylo on the Defiance while the Emperor met with his naval chiefs in Baylo's office on the training ship. It was during this training session that Vader began to believe that Sidious was treating him much the same way the Jedi Council had previously: acting as he knew better, keeping information from Vader, giving him "busywork." Baylo ordered the Defiance to enter hyperspace on a course for Christophsis. Cadet Rae Sloane entered the coordinates, only to have her hyperspace path overridden by Baylo, who said she was going to send them too close to a singularity.
Sloane studied the path, suspecting that Baylo was incorrect in his adjustment. Vader and Sloane discovered that the changed hyperspace route would crash the Defiance into Christophsis' sun, killing all aboard. Vader ordered Sloane to correct the problem, and without revealing that he knew of Baylo's treachery, Vader and Baylo went to see the Emperor. The Emperor ordered Baylo to turn over command of the Defiance and take a position at the training center on Corellia. Baylo, however, was loyal to the Republic and considered the Empire a hostile power. Instead of turning over his command, Baylo offered his resignation from the navy. Vader then revealed he knew of Baylo's plan to crash the Defiance, and the Emperor congratulated Vader for handling the "petty problem," annoying him. As Baylo railed against the Emperor, Vader Force-choked him to death, drawing ire from the Emperor, who had wished to see Baylo suffer and force him to watch his beloved Navy be turned into something he hated and have the Defiance be melted down into cafeteria trays. Above all, he wanted to use Baylo for his own ambitions since the old man was willing to kill his own students for a cause. Vader tried to explain that his way was more efficient, but the Emperor wanted to hear nothing of it as he did not order him to kill Baylo. Later, he ordered Sloane to have the Defiance renamed the Obedience as a subtle final jab at Baylo and a not-so-subtle reminder toward Vader to learn his place.
Crash land on Ryloth
Shortly thereafter, Vader and the Emperor reboarded the Perilous and resumed their course to the Ryloth system. However, upon their exit from hyperspace, the ship immediately began slamming into spacial mines set up by Cham Syndulla's rebels. Hidden amongst these mines were specialized devices designed to drain the ship's shields, which began to buckle under the continual assault. As the shields neared failure, a swarm of several hundred reprogrammed Vulture Droids set upon the Perilous from the system's asteroid belt. Vader boarded his personal interceptor and took several squadrons of Imperial pilots to destroy the droid fighters and mines, but discovered a short time into the battle that Vulture Droids were each carrying a payload of explosive buzz droids. Realizing that the Vultures themselves were simply delivery systems meant to unload the buzz droids near or inside the Star Destroyer, Vader ordered his squadron to concentrate fire on them, as they presented a far greater threat than the mines. But between the mines and the Vultures, there were simply too many targets for Vader and his squadrons to handle, and the Perilous was severely damaged. The second wave of Vultures was detected immediately after the first had been destroyed, further compounding the already bleak situation. A message came to Vader from Captain Lewitt of the Perilous that the ship could sustain virtually no more damage without being destroyed.
Vader moved to intercept the second wave alone, ordering his squadrons to remain near the Perilous to destroy any droids that got past him. Though incredulous, the squadron commander obeyed, and Vader used the Force to begin tearing apart the compartments on the Vulture droids that housed the explosive buzz droids. He then used the Force to begin flinging the buzz droids at other incoming fighters and repeated this process until the vast majority of the Vulture Droids had been destroyed. The remaining fighters were annihilated by Vader's squadrons, and he himself returned to the Perilous. Vader marched to the Star Destroyer's bridge and Force choked Taa for a short time, informing him of the traitor in his staff that had been responsible for the assault on the Perilous. Utterly terrified, the Senator vowed to find the traitor, but the Emperor had Taa and his staff confined to their quarters. An order was then broadcast from the Imperial headquarters on Ryloth for any and all repair ships to aid the Perilous as it sped, badly damaged, towards the planet.
Unbeknownst to Vader, some of the Twi'lek repair teams in fact comprised members of the Free Ryloth movement, one of which was a group of saboteurs with orders to plant timed explosives on the hyperdrive core of the Perilous. Shortly after the teams landed, one of the Free Ryloth groups engaged in a firefight with Imperial stormtroopers. When Vader learned of this, he ordered all of the Twi'lek repair teams, numbering over 100, to be killed regardless of whether they were aiding the assault and proceeded to Deck 17, where the firefight had been reported. On the way, he killed a group of apparently uninvolved Twi'leks before proceeding to the hyperdrive chamber. The saboteurs, who were led by Cham's second in command, Isval, had managed to seal the hatch to the hyperdrive core before any Imperial troops could interrupt them, and Vader began to use his lightsaber to cut it open.
By the time Vader finished cutting through the hatch, the saboteurs had already concluded their business and escaped. The main hyperdrive core had been riddled with timed charges, set to detonate if anyone attempted to disarm or remove them. Vader concluded that the ship was lost, and ordered the captain to evacuate. Vader contacted Sidious, who instructed his apprentice to meet him aboard his shuttle. Before departing, however, Vader made one last attempt to kill the saboteurs, but they narrowly evaded him and escaped in an Imperial escort boat. Subsequently, Vader reunited with the Emperor and left on the shuttle, mere minutes before the Star Destroyer exploded. Shortly thereafter, the Imperial traitor Belkor Dray provided Cham with the transponder identity of the Emperor's shuttle, and he directed Isval and her group aboard the escort boat to attack it. Vader's exceptional piloting skills allowed him to evade the boat and then fly upside down over its cockpit within direct visual range of its pilots. Once there, he used the Force to choke both Isval and her co-pilot, but before losing consciousness, Isval rammed the shuttle with her escort boat. The crash disabled the shuttle's main power, and Vader had to use a nearly depleted backup battery to attempt a crash landing on Ryloth. As he guided the ship through the atmosphere, he had flashbacks of events and people from his past. Though distracted, Vader managed to land the ship in Ryloth's equatorial forest region, but his distraction did not go unnoticed by the Emperor, who noted that the landing had been poor compared to what he knew Vader to be capable of.
Not too long afterward, the Twi'lek insurgents continued their assault on freighters, prompting Vader and the Emperor to take action and destroy them, before moving away from their fallen shuttle. At night, they stopped to rest, when the Emperor questioned his regret and loyalty, but Vader showed himself devoted still. They were soon attacked by a lylek horde, forcing them to retreat into a tunnel, unaware that they had entered their nest. They stood their ground against hundreds of lyleks and their significantly threatening queen, and killed them all before exiting the tunnel and finding a young Twi'lek, Drua. When the Emperor tried to kill her, Vader stopped him, intending to have the girl guide them to her village, where they obtained a communicator to speak with Moff Mors.
After giving them their coordinates, they were finally surrounded by Syndulla's forces, but so did Mors's, aiding them in quelling the rebellion. As the stormtroopers killed the Twi'leks, Vader noticed a trio of Twi'leks—Syndulla, Isval and Goll—watching from afar and went on to kill them, but Goll and Syndulla escaped, leaving Vader to capture Isval and bring her before the Emperor. He mocked her, telling her that her people had accomplished nothing, and Vader subsequently executed her. On the Emperor's orders, Vader then killed the villagers to leave no witnesses, concluding their mission.
- "We haven't stood on Coruscant in some time, Governor."
"The needs of the Empire keep us elsewhere occupied, Lord Vader."
- ―Darth Vader and Wilhuff Tarkin
When Moff Tarkin's Sentinel Base was attacked, Vader was stationed in the Imperial Palace on Coruscant, where he held a court with the Deputy Director of the ISB, Harus Ison, berating Coruscanti criminals as well as Prefect Phoca Soot of Level 1331, for ignoring the Emperor's decrees. Telling them to move their operations out of Coruscant, Vader then made an example of Soot for his disrespect and crushed his heart with the Force, and adjourned the court to meet with Tarkin and Grand Vizier Mas Amedda. The latter politely asked Vader to refrain from killing all those who displeased him, to which the Sith replied that he would give thought to the matter, before greeting Tarkin and sharing the latest developments of the Death Star's construction.
The pair separated when Vader left Tarkin, who met with the Emperor alone. Afterward, Vader (like Tarkin and Amedda) partook in a meeting between the Imperial Ruling Council, and the leaders of Imperial Security Bureau and Naval Intelligence Agency in the palace's audience chamber, overseen by the Emperor. He then assigned Tarkin and Vader to a mission on Murkhana to investigate recently discovered Shadowfeed technology and its relationship to the attack on Sentinel Base. The pair traveled to the planet on the Carrion Spike, which Vader made to carry his meditation chamber.
On Murkhana, however, the Spike was stolen by unknown dissidents, prompting Vader and Tarkin to kill the Sugi crime lord Faazah, and take his Parsec Predator to pursue the stolen ship, hidden by its cloaking systems. Making use of his connection to his meditation chamber, Vader pinpointed the rebels' location to the Fial system and later, the Galidraan system, where they engaged the Spike before they jettisoned his meditation chamber and escaped to Lucazec. With the Predator disabled, Vader and Tarkin boarded the Liberator, from which Vader issued his black Eta-2 interceptor to be transported on the Goliath from Coruscant.
On the Goliath, Tarkin told Vader that the insurgency was surely being supported by someone high up in the Imperial Military, and predicted that the insurgents would go to Phindar to refuel the Spike. Subsequently, Vader led a squadron to attack the stolen corvette in the Phindar system. Though they greatly damaged the ship, it escaped, prompting Tarkin and Vader to calculate its trajectory to Obroa-skai system. Teller transmitted false intelligence that the insurgents were heading to the Obroa-skai system. Hoping to capture the Carrion Spike, Tarkin and Vader deployed substantial Imperial resources including three Interdictor vessels. The prototype Immobilizer 418 cruiser malfunctioned, yanking several ships out of hyperspace and causing a massive accident.
Despite failing to catch the Spike, the Imperials managed to capture the YT-1000 light freighter Reticent, which Teller had sent as a decoy to throw the Imperials off-scent. While Vader interrogated its Koorivar captain on the Executrix, Tarkin accessed Imperial databases and discovered the identities of the insurgents, including its leader Berch Teller. Vader also interrogated the Reticent's Sy Myrthian navigator, who suffered a heart attack. However, Vader learned from one of his contacts in the Crymorah syndicate that a lieutenant had negotiated a deal with the Sugi crime lord Faazah for a supply of custom fuel cells. These fuel cells had reached Murkhana shortly before Tarkin and Vader's arrival, thus confirming that Faazah had been colluding with the insurgents.
After a private holo transmission with the Emperor, Vader told Tarkin that Vice Admiral Dodd Rancit was sure the insurgents would attack the Imperial academy at Carida next. Then, Vader parted ways with Tarkin to meet with Rancit, but not before asking for the meaning behind the Carrion Spike's name and Tarkin told him about his test in Eriadu's Carrion Plateau. On the Carida system, Vader boarded the Secutor-class Star Destroyer Conquest and met Rancit just as the Spike reverted to realspace, astrogating on autopilot. Aware of Rancit's treason, as a co-conspirator of Teller, Vader had Lieutenant Crest place Rancit aboard an escape pod and had Rancit give himself the command to issue the fire order that destroyed it. Elsewhere, Tarkin dealt with the rebels, ending the insurgency.
Following the defeat of Teller's insurgents, Vader spent the next three weeks helping Tarkin to interrogate the captured insurgents with the exception of Teller, who managed to escape. While none of the insurgents had died under questioning, the Emperor had the insurgents executed privately. Vader also led a crackdown on the warehouse workers and salvages who supplied Teller's dissidents along with several scientists at Desolation Station who had provided Teller with information. Vader also took action against the Tenloss Syndicate and lower-level members of the Crymorah syndicate who had assembled Berch Teller's warship, a modified Providence-class Dreadnought.
Submission to Ahr
Vader later participated in an attack on the planet Namzor, where he eliminated a group of insurgents. In the process, he destroyed the rebels' stores of coaxium, violating the command of Imperial Governor Ahr, who was charged with securing the hyperfuel. The governor brought his frustrations to the Emperor. Sensing Vader's anger, the Emperor commanded his apprentice to follow any and all orders from the governor until Vader had learned his lesson.
Ahr took great pleasure in his newfound power, sending Vader on increasingly dangerous missions throughout his sector. He sent Vader to fight alone against the renegade droids of Ahn Krantarium, and later retracted his forces on Phelzepham, leaving Vader to battle the moon's insurgents by himself. Though he wished to kill the governor, Vader continued to obey Ahr's commands.
Governor Ahr brought his ship to the Kankalo Belt Containment Zone, an asteroid field in which a great creature resided. He commanded Vader to eliminate "the greatest threat" he could find. Seeing an opportunity, Vader confronted Ahr, recognizing him as his true threat. Before Vader could strike, Ahr ordered the Dark Lord to kneel before him. Vader obeyed, but the creature attacked the vessel, pulling the governor out into the void of space and freeing Vader from his submission.
Hunt on Chandar's Folly
Tarkin still owed Vader a favor for capturing Lee-Char on Mon Cala. After some time, Vader came to Tarkin with his request, and, as he learned of Tarkin's hunting, Vader asked Tarkin to hunt him down. Vader told him to keep him on his feet, killing him if he had to. Tarkin was shocked at this and began considering why Vader would ask him to hunt him. Tarkin looked through the reports from the Inquisitorius and saw that Vader's hunt for the Jedi had left him with little to no challenge. Tarkin deduced that Vader wanted to be challenged again and was flattered that he had chosen him.
The hunt took place on the Outer Rim planet Chandar's Folly, and Tarkin immediately began trying to take on the Dark Lord of the Sith. Knowing of Vader's brutal abilities, Tarkin outfitted the hunters with slugthrowers and flamethrowers to avoid the possibility of Vader deflecting their shots. On the second day, they cornered Vader at a copse of Thurian trees, and four hunters engulfed him with their flamethrowers. As Tarkin watched Vader get covered by the flames, he thought he saw fear in his body language. Vader's possible fear was brief, however, as he targeted the hunters' flamethrowers, incinerating the four hunters. Through the following days, Tarkin saw that Vader was not hard to track, leaving clear signs wherever he went. They learned why as on multiple occasions Vader ambushed them. On one occasion, Tarkin and his hunters were tracking Vader near a cliff when he revealed himself and killed one of the hunters with his. Two others fired on him but failed to kill him.
Tarkin realized that as long as Vader had his lightsaber, he couldn't be beaten. So over the course of the next four days, he attempted to steal Vader's weapon. After six men perished, one of Tarkin's hunters managed to snatch it out of Vader's grip while he was fighting. After this, Tarkin saw that not only was Vader turning to new tactics, he was angrier. Tarkin knew that enraged prey was usually easier to take out, but he admitted that this rule did not apply to Vader. Soon after, Vader fought five of Tarkin's hunters as they fired on him, hitting him many times and scarring his armor. Tarkin watched from a hilltop as Vader came close to the hunters and used the Force to snap one's neck. The other hunters retreated, and Vader Force-choked another to death. Once understanding how capable Vader was with the Force, Tarkin assumed that the hunt would soon end. However, Tarkin soon realized that Vader was so keen on getting back his lightsaber, that so long as Tarkin's team hunted him, he hunted them.
On the ninth day of the hunt, Tarkin was down to his last seven hunters. Vader managed to kill a Valath, the apex predator on the planet, and take its hide, which could help him camouflage better. One of Tarkin's Chadra-Fan hunters, Sissian, spotted Vader northwest of Tarkin's camp, and the hunter Yerga notified Tarkin of this. Tarkin got his binoculars and saw Vader on top of a peak wearing the Valath hide. Tarkin had his hunters form a group around him, and they walked in Vader's direction. Vader lured them into a ravine of blue crystals, where his breathing could echo and be untraceable by Sissian and his grandfather, Hardhear. Hardhear heard Vader's breathing, but although he could say Vader was near, he could not say which direction. Vader loomed over them at the top of the ravine and watched as Tarkin ordered his team to run. The group ran down the ravine, and Vader made his move, Force-pushing one of the hunters into the ravine wall. Vader then Force-choked Hardhear before leaping down, under the cover of his Valath hide, and attacking the droid hunter.
Tarkin had the rest of his team run into the Stormlands, where it was open ground. They set up camp, and Sissian listened for Vader's breathing. However, Vader had deactivated his suit, which stopped his breathing apparatus from giving him away, and he slowly crept up to the camp, before Force choking Sissian. Yerga attempted to attack Vader, but he took her by the neck and killed her. The last two hunters opened fire, and Vader used the Force to retake his lightsaber. Tarkin then jumped at the two hunters and slaughtered them. Tarkin ran away from Vader, but after realizing he would catch up with him eventually, he stopped and fell to his knees. Vader loomed over him, not realizing that as he was standing higher than Tarkin, he was more susceptible to the lightning in the Stormlands.
Without warning, Vader was struck by lightning and he fell to the ground. Tarkin got up and contacted his flagship, the Carrion Spike, to pick them up. Tarkin sat by Vader and waited for the Carrion Spike to arrive. The corvette soon approached them, being frequently struck by lightning due to its height in the Stormlands. Vader remained immobile and Tarkin told him that whatever he had hoped to learn from this madness, he hoped he had learned it. Tarkin then told Vader that he would get him to a repair bay soon enough. However, Vader wasn't finished yet, and he Force-choked Tarkin, showing him that he hadn't lost just yet. Tarkin soon crawled from the range of Vader's Force abilities, and Vader continued lying there.
Hunt for Eeth Koth
Vader, along with the Fifth Brother and two other Inquisitors, was able to track down former Jedi Master and Council member Eeth Koth to a planet where he was a priest of the Church of the Ganthic Enlightenment. Vader approached Koth after the birth of his daughter. Koth offered Vader codes, secret contact frequencies and a way to find other purge survivors, knowing that he was not a threat to anyone. As Koth's wife and child made their escape, Vader fought Koth.